RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 LINGO2Q7L985 606 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 TRPV1Q8NER1 839 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ALG2Q9H553 416 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 PRR5P85299 388 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ZNF234Q14588 700 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 OGFRL1Q5TC84 451 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 OR8H3Q8N146 312 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 AADATQ8N5Z0 425 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 MGME1Q9BQP7 344 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ADAM28Q9UKQ2 775 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 DHRS12A0PJE2 317 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 NOL4O94818 638 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 UBXN7O94888 489 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 POU2F1P14859 743 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 ANKRD46Q86W74 232 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 DNAJC28Q9NX36 388 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ZNF639Q9UID6 485 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 ACKR2O00590 384 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 CDK16Q00536 496 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 CAPN13Q6MZZ7 669 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 TDRPQ86YL5 185 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 CRYBG2Q8N1P7 616 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 Q8N9G6 341 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 EIF1AYO14602 144 aaKnown RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 PAPSS2O95340 614 aaPredicted RBP13.12□□□□□ -0.31
NEK9-201ENST00000238616 IDO1P14902 403 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 MAGEA12P43365 314 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 C2orf27AQ580R0 203 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
NEK9-201ENST00000238616 L7N2F9 121 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 PLOD2O00469 737 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ELNP15502 786 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 MAPK8P45983 427 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CAV3P56539 151 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 VAMP2P63027 116 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 BNIP2Q12982 314 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 MYO19Q96H55 970 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 SEC61A2Q9H9S3 476 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 POU2F3Q9UKI9 436 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CKAP5Q14008 2032 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 LINGO3P0C6S8 592 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CHADO15335 359 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 SLC22A3O75751 556 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 NTSR2O95665 410 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TUBB3Q13509 450 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 COX18Q8N8Q8 333 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 DCBLD1Q8N8Z6 715 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 KCTD4Q8WVF5 259 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TBCBQ99426 244 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TBX5Q99593 518 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CLCA3PQ9Y6N3 262 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 VSTM5A8MXK1 200 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 SNAP91O60641 907 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 GRK6P43250 576 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 DLG4P78352 724 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 AMIGO2Q86SJ2 522 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 PPM1MQ96MI6 270 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CHST10O43529 356 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 RGS10O43665 173 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 SEPHS1P49903 392 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 USP4Q13107 963 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 INO80EQ8NBZ0 244 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 MMADHCQ9H3L0 296 aaPredicted RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 ASB7Q9H672 318 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms