RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MARC1Q5VT66 337 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 TFAP2DQ7Z6R9 452 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 SYVN1Q86TM6 617 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 NAT16Q8N8M0 369 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 CHDHQ8NE62 594 aaPredicted RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 STAG3L4Q8TBR4 150 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 KIAA1191Q96A73 305 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 AURKBQ96GD4 344 aaPredicted RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 TMEM209Q96SK2 561 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 ACOX2Q99424 681 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 DGCR6LQ9BY27 220 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 POPDC3Q9HBV1 291 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 FAM118AQ9NWS6 357 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 SUN2Q9UH99 717 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 RNF112Q9ULX5 631 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 FAM234BA2RU67 622 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 C16orf96A6NNT2 1141 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 SNX2O60749 519 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 RPS17P08708 135 aaKnown RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 HAPLN1P10915 354 aaPredicted RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 PCSK1P29120 753 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 TMED10P49755 219 aaKnown RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 DLEU7Q6UYE1 221 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 BEND5Q7L4P6 421 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 SCML4Q8N228 414 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ITFG1Q8TB96 612 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 HMCESQ96FZ2 354 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 AGO3Q9H9G7 860 aaKnown RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 SMURF2Q9HAU4 748 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 TMLHEQ9NVH6 421 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ATAD3AQ9NVI7 634 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 PDE10AQ9Y233 779 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ARL5AQ9Y689 179 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 CCDC162PA2VCL2 907 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 XYLBO75191 536 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ECI2O75521 394 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 NPPAP01160 153 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 HOXB8P17481 243 aaPredicted RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 MTHFRP42898 656 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 IST1P53990 364 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ERVK-8P63133 956 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ACVR1Q04771 509 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ZNF846Q147U1 533 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 TTC23Q5W5X9 447 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 MRNIPQ6NTE8 343 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 UGT3A1Q6NUS8 523 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ZDHHC13Q8IUH4 622 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 PARP8Q8N3A8 854 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 PPM1MQ96MI6 270 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 HEPHQ9BQS7 1158 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 AARSD1Q9BTE6 412 aaKnown RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 NUSAP1Q9BXS6 441 aaKnown RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 ZIM2Q9NZV7 527 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 EVLQ9UI08 416 aaPredicted RBP15.37■□□□□ 0.05
DDX55-201ENST00000238146 ST14Q9Y5Y6 855 aa15.37■□□□□ 0.05
DDX55-201ENST00000238146 TREHO43280 583 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 PIGAP37287 484 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 AGTR2P50052 363 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 RAD23AP54725 363 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 MTPNP58546 118 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 CTU2Q2VPK5 515 aaKnown RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 FAM98BQ52LJ0 330 aaKnown RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 PAQR3Q6TCH7 311 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 GPR150Q8NGU9 434 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 MUL1Q969V5 352 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 MBOAT4Q96T53 435 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 GAD1Q99259 594 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 PAAF1Q9BRP4 392 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 SMOC2Q9H3U7 446 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 CARS2Q9HA77 564 aaKnown RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 ABCC13Q9NSE7 274 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 MIOSQ9NXC5 875 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 GIN1Q9NXP7 522 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 ENPP5Q9UJA9 477 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 BAG5Q9UL15 447 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 LOC285095A0A1B0GVY8 99 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 G3V2T6 193 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 HPRP00739 348 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 UGT2B4P06133 528 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 ANXA6P08133 673 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 UROSP10746 265 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 HPCAL1P37235 193 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 OCA2Q04671 838 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 CHRNB3Q05901 458 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 PRKG2Q13237 762 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 TSNQ15631 228 aaKnown RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 CTF1Q16619 201 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 TIGD5Q53EQ6 642 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 SETMARQ53H47 684 aaPredicted RBP15.36■□□□□ 0.05
DDX55-201ENST00000238146 C6orf136Q5SQH8 315 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 PERM1Q5SV97 790 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 SULT1C3Q6IMI6 304 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 LAIR2Q6ISS4 152 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 FAM171BQ6P995 826 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 ZFAND4Q86XD8 727 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 DPP10Q8N608 796 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 FAM86B1Q8N7N1 296 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 OR13C4Q8NGS5 318 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms