RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 SMIM24O75264 130 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 GFAPP14136 432 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 YPEL5P62699 121 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 POU4F1Q01851 419 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 GAS6Q14393 721 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 CSHL1Q14406 222 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 SUZ12Q15022 739 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 LRRC8EQ6NSJ5 796 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 SLC41A1Q8IVJ1 513 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 SPATS2LQ9NUQ6 558 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 SPASTQ9UBP0 616 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 POP7O75817 140 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 HAUS5O94927 633 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 ITGA2BP08514 1039 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 ACRV1P26436 265 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 OVGP1Q12889 678 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 RFLNAQ6ZTI6 216 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 MYLK4Q86YV6 388 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 CILP2Q8IUL8 1156 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 NKAPQ8N5F7 415 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 CLDN19Q8N6F1 224 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 OR56A4Q8NGH8 313 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 MAGEC3Q8TD91 643 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 KLC4Q9NSK0 619 aa11.01□□□□□ -0.65
TNFAIP3-201ENST00000237289 A0A1W2PPC4 97 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZBTB14O43829 449 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CATP04040 527 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MYCLP1P12525 358 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 JUNDP17535 347 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CSNK1EP49674 416 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CDK3Q00526 305 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 DBN1Q16643 649 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 PSAPL1Q6NUJ1 521 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 LMX1AQ8TE12 382 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CD274Q9NZQ7 290 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 TDRKHQ9Y2W6 561 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 PPIL1Q9Y3C6 166 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ATXN2Q99700 1313 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 DLL1O00548 723 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 KHNYNO15037 678 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CYP2A7P20853 494 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 DAB2P98082 770 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 INAVAQ3KP66 663 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZNF542PQ5EBM4 170 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 TEDDM1Q5T9Z0 273 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 HECTD2Q5U5R9 776 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CNSTQ6PJW8 725 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CEP76Q8TAP6 659 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MCOLN3Q8TDD5 553 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CCT6BQ92526 530 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 OR2M4Q96R27 311 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CTNNAL1Q9UBT7 734 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 RUVBL2Q9Y230 463 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 PRKAB1Q9Y478 270 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 A0A096LPK6 155 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MROH6A6NGR9 719 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 PHGDHO43175 533 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 AP2A2O94973 939 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MPOP05164 745 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 BRAFP15056 766 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 DCDC1P59894 354 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ELOCQ15369 112 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZNF648Q5T619 568 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZNF534Q76KX8 674 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 GKN2Q86XP6 184 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 C4orf33Q8N1A6 199 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 TMEM105Q8N8V8 129 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 FAM46DQ8NEK8 389 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 TSACCQ96A04 125 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 SLC6A18Q96N87 628 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CCM2Q9BSQ5 444 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 IMP3Q9NV31 184 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 APOBEC3BQ9UH17 382 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ASF1AQ9Y294 204 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CLGNO14967 610 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ABRQ12979 859 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 EFTUD2Q15029 972 aaKnown RBP eCLIP11□□□□□ -0.653e-6■■□□□ 11.8
TNFAIP3-201ENST00000237289 UAP1L1Q3KQV9 507 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 PRRT3Q5FWE3 981 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CWF19L1Q69YN2 538 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 SLC30A9Q6PML9 568 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 WDR5BQ86VZ2 330 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 ZBTB2Q8N680 514 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 FAM76AQ8TAV0 307 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 SPOCK2Q92563 424 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CCDC97Q96F63 343 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 AHCYL2Q96HN2 611 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 GPR21Q99679 349 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 MED4Q9NPJ6 270 aa11□□□□□ -0.65
TNFAIP3-201ENST00000237289 USP36Q9P275 1121 aaKnown RBP11□□□□□ -0.65
TNFAIP3-201ENST00000237289 CPSF2Q9P2I0 782 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms