RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZNF214Q9UL59 606 aaPredicted RBP8.16□□□□□ -1.1
APOB-201ENST00000233242 C2orf71A6NGG8 1288 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 STOMP27105 288 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 HECTD2Q5U5R9 776 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 GPR65Q8IYL9 337 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SEMA3CQ99985 751 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 EI24O14681 340 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 CETPP11597 493 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 THOP1P52888 689 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 MAPK12P53778 367 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SLC25A52Q3SY17 297 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 ZNF730Q6ZMV8 503 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SLC22A16Q86VW1 577 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 P2RY11Q96G91 374 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 FRMD6Q96NE9 622 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SLC35C2Q9NQQ7 365 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 ANKRD63C9JTQ0 380 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 ZNF701M0R085 212 aaPredicted RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 ABRQ12979 859 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 TEX44Q53QW1 395 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 DAW1Q8N136 415 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 PARP8Q8N3A8 854 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 NSMCE3Q96MG7 304 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 THUMPD1Q9NXG2 353 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 U3KQV3 271 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 ADAMTS13Q76LX8 1427 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 STK16O75716 305 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 PTPN1P18031 435 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 BUD31P41223 144 aaPredicted RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 TMEM169Q96HH4 297 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 FEM1AQ9BSK4 669 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 MTIF3Q9H2K0 278 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 ATP13A3Q9H7F0 1226 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 INSRRP14616 1297 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 GOT1P17174 413 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 UTS2BQ765I0 119 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 GLIS3Q8NEA6 775 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SRFBP1Q8NEF9 429 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 SEC14L3Q9UDX4 400 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 CAPN15O75808 1086 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 PIAS1O75925 651 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 SRPRAP08240 638 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 ADAM15Q13444 863 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 RFTN1Q14699 578 aaPredicted RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 FAM83AQ86UY5 434 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 PIGXQ8TBF5 258 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 URADA6NGE7 173 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 GATBO75879 557 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 NPPAP01160 153 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 DNAJA1P31689 397 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 ZNF234Q14588 700 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 COLEC12Q5KU26 742 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 BCL7BQ9BQE9 202 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 NFKBIZQ9BYH8 718 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 OSGEPL1Q9H4B0 414 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.1
APOB-201ENST00000233242 PCDHGB6Q9Y5F9 930 aa8.15□□□□□ -1.1
APOB-201ENST00000233242 RPP40O75818 363 aaKnown RBP8.15□□□□□ -1.11
APOB-201ENST00000233242 NFAT5O94916 1531 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 PGLSO95336 258 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 GRIA2P42262 883 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 GNA12Q03113 381 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 SETMARQ53H47 684 aaPredicted RBP8.15□□□□□ -1.11
APOB-201ENST00000233242 ULK3Q6PHR2 472 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ZNF781Q8N8C0 355 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ISOC1Q96CN7 298 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 CSPG4P5Q96PW8 444 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 PCDHB18PQ96TA0 734 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ZYG11BQ9C0D3 744 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 MIOSQ9NXC5 875 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 RDH8Q9NYR8 311 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 NCKAP1Q9Y2A7 1128 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ZNF451Q9Y4E5 1061 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 FBP2O00757 339 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 VTNP04004 478 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ULBP1Q9BZM6 244 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ASB8Q9H765 288 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 MAB21L2Q9Y586 359 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 GNASQ5JWF2 1037 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 HID1Q8IV36 788 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ZNF567Q8N184 647 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 SLC38A4Q969I6 547 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 TCF25Q9BQ70 676 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ITPAQ9BY32 194 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 RANBP3Q9H6Z4 567 aaPredicted RBP8.15□□□□□ -1.11
APOB-201ENST00000233242 ZNF696Q9H7X3 374 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 CALML5Q9NZT1 146 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 ALG5Q9Y673 324 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 MYO18AQ92614 2054 aaKnown RBP8.15□□□□□ -1.11
APOB-201ENST00000233242 SLC28A2O43868 658 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 HMGN1P05114 100 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 NPR2P20594 1047 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 F8A1P23610 371 aa8.15□□□□□ -1.11
APOB-201ENST00000233242 RPL9P32969 192 aaKnown RBP8.15□□□□□ -1.11
APOB-201ENST00000233242 SNRPD1P62314 119 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms