RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TOR1BO14657 336 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 AZGP1P25311 298 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 PRDX6P30041 224 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CORO1AP31146 461 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 HNMTP50135 292 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 ZFP69Q49AA0 526 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 MPPE1Q53F39 396 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PTCD2Q8WV60 388 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 BTN2A3PQ96KV6 586 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PRDM8Q9NQV8 689 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 SEC14L3Q9UDX4 400 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 SSR2P43308 183 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 ZNF132P52740 706 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 C2orf80Q0P641 193 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 C10orf82Q8WW14 230 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 FEM1AQ9BSK4 669 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 SIX2Q9NPC8 291 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 DNAJC11Q9NVH1 559 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 ADAMTS3O15072 1205 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 NOS1APO75052 506 aaPredicted RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 CLDN9O95484 217 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 GABRR2P28476 465 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 PTP4A2Q12974 167 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 CA9Q16790 459 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 HKDC1Q2TB90 917 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 POMZP3Q6PJE2 187 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 ZDHHC24Q6UX98 284 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 COPS4Q9BT78 406 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 GATA5Q9BWX5 397 aaPredicted RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 NMUR1Q9HB89 426 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 PNPLA8Q9NP80 782 aa13.27□□□□□ -0.28
NEK4-201ENST00000233027 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 ZFP37Q9Y6Q3 630 aaPredicted RBP13.27□□□□□ -0.28
NEK4-201ENST00000233027 GPR25O00155 361 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 SCN2BO60939 215 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CES1P23141 567 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CLCNKBP51801 687 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 ADGRE1Q14246 886 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CNPY1Q3B7I2 92 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 PARP15Q460N3 678 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 XAGE5Q8WWM1 108 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 DIRAS2Q96HU8 199 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 GALNT8Q9NY28 637 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 COL20A1Q9P218 1284 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 RCOR3Q9P2K3 495 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 FZD10Q9ULW2 581 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 PRMT5O14744 637 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 TPST2O60704 377 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 C1RP00736 705 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 HOXC6P09630 235 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 OR1D2P34982 312 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CAPN13Q6MZZ7 669 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 DAW1Q8N136 415 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 FSTL5Q8N475 847 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 STYXQ8WUJ0 223 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CNPPD1Q9BV87 410 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 ITGB1BP2Q9UKP3 347 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 POMPQ9Y244 141 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 STXBP5LQ9Y2K9 1186 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 ARHGEF33A8MVX0 844 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 TSPAN1O60635 241 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 RLN1P04808 185 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 UROSP10746 265 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 ARL2P36404 184 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 TDRPQ86YL5 185 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 KIAA1522Q9P206 1035 aaPredicted RBP13.27□□□□□ -0.29
NEK4-201ENST00000233027 TESMINQ9Y4I5 508 aa13.27□□□□□ -0.29
NEK4-201ENST00000233027 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 SLC9A3R1O14745 358 aaPredicted RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 TCF4P15884 667 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CCNCP24863 283 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CCR10P46092 362 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 OLR1P78380 273 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CACNG1Q06432 222 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 ACSBG2Q5FVE4 666 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 DCAF12L1Q5VU92 463 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 CHSY3Q70JA7 882 aa13.26□□□□□ -0.29
NEK4-201ENST00000233027 EXOSC8Q96B26 276 aaKnown RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 SSU72Q9NP77 194 aaKnown RBP13.26□□□□□ -0.29
NEK4-201ENST00000233027 LSM1O15116 133 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms