RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CDH22Q9UJ99 828 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 TNFRSF11BO00300 401 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 CILPO75339 1184 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 TACR2P21452 398 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 SLC5A3P53794 718 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 ELP6Q0PNE2 266 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 LAPTM5Q13571 262 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 VWA5B1Q5TIE3 1220 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 ADCY4Q8NFM4 1077 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 GIPC3Q8TF64 312 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 GPR20Q99678 358 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 CD84Q9UIB8 345 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 DISP2A7MBM2 1401 aa11.47□□□□□ -0.57
LAMA4-201ENST00000230538 PER2O15055 1255 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 FFAR2O15552 330 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 STBD1O95210 358 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 MMP8P22894 467 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 GPD2P43304 727 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 CBX5P45973 191 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 TSC22D1Q15714 1073 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 FOXR2Q6PJQ5 311 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 MON1BQ7L1V2 547 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 FAM81AQ8TBF8 368 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 CHRAC1Q9NRG0 131 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 TBC1D14Q9P2M4 693 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 PTPRJQ12913 1337 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 ELOVL7A1L3X0 281 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.57
LAMA4-201ENST00000230538 RGS10O43665 173 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 PPP1R11O60927 126 aaPredicted RBP11.46□□□□□ -0.57
LAMA4-201ENST00000230538 NDST3O95803 873 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 VIPP01282 170 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 LAG3P18627 525 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 GTF2H2Q13888 395 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 GTF2H2CQ6P1K8 395 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 EXOSC8Q96B26 276 aaKnown RBP11.46□□□□□ -0.57
LAMA4-201ENST00000230538 RNF31Q96EP0 1072 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 CIB1Q99828 191 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 CORO1CQ9ULV4 474 aaPredicted RBP11.46□□□□□ -0.57
LAMA4-201ENST00000230538 AP2A2O94973 939 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 UROSP10746 265 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 RHOQP17081 205 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 SDC2P34741 201 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 MPP1Q00013 466 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 HSF2Q03933 536 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
LAMA4-201ENST00000230538 VPS26BQ4G0F5 336 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 ATP13A5Q4VNC0 1218 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 RGMBQ6NW40 437 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 MOB2Q70IA6 237 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 CADM2Q8N3J6 435 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 SLC4A11Q8NBS3 891 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 HAVCR1Q96D42 359 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 HIPK3Q9H422 1215 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 MIOSQ9NXC5 875 aa11.46□□□□□ -0.57
LAMA4-201ENST00000230538 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF879B4DU55 563 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 PLK4O00444 970 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 STK16O75716 305 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 IDSP22304 550 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 RAB25P57735 213 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 DSC2Q02487 901 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 PCDH1Q08174 1060 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 ITGA7Q13683 1181 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 FAM129CQ86XR2 697 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 TRPV1Q8NER1 839 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 IRGQQ8WZA9 623 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 CNPPD1Q9BV87 410 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 IPPKQ9H8X2 491 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 DCCP43146 1447 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 SIN3BO75182 1162 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 NOL4O94818 638 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 CDK14O94921 469 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 RASGRP1O95267 797 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 DHFRP00374 187 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.58
LAMA4-201ENST00000230538 OGNP20774 298 aaKnown RBP11.46□□□□□ -0.58
LAMA4-201ENST00000230538 CCNCP24863 283 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 NAE1Q13564 534 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 CLEC6AQ6EIG7 209 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 HPS1Q92902 700 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 NMUR1Q9HB89 426 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 DEC1Q9P2X7 70 aa11.46□□□□□ -0.58
LAMA4-201ENST00000230538 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.58
LAMA4-201ENST00000230538 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.58
LAMA4-201ENST00000230538 IQCF5A8MTL0 148 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 FADS2P1A8MWK0 482 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 LYPLA2O95372 231 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 AP2A1O95782 977 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CLUP10909 449 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CMPK1P30085 196 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 MED27Q6P2C8 311 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 RFWD3Q6PCD5 774 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms