RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PIGFQ07326 219 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 EIF4EBP2Q13542 120 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 PHKG1Q16816 387 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 TIGD2Q4W5G0 525 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 AFMIDQ63HM1 303 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 ZDHHC13Q8IUH4 622 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 DPP10Q8N608 796 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 HPS1Q92902 700 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 TFB2MQ9H5Q4 396 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 LTB4R2Q9NPC1 389 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 FBXO8Q9NRD0 319 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 SACM1LQ9NTJ5 587 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 MYBPHLA2RUH7 354 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 CCL22O00626 93 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 INMTO95050 263 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 PIGAP37287 484 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 MTHFRP42898 656 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 CD47Q08722 323 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 TOP3AQ13472 1001 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 KCNJ8Q15842 424 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 CCDC80Q76M96 950 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 RBM23Q86U06 439 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 HERC2P3Q9BVR0 1158 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 CATSPERBQ9H7T0 1116 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 TMEM45AQ9NWC5 275 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 ZIM2Q9NZV7 527 aa13.87□□□□□ -0.19
SCNN1A-201ENST00000228916 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 OR51F1A6NGY5 319 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 G3V2T6 193 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SLC4A1P02730 911 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 MMP3P08254 477 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 HTR7P34969 479 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 CASP2P42575 452 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PCBP1Q15365 356 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 INAVAQ3KP66 663 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PRR23BQ6ZRT6 265 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ITFG1Q8TB96 612 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 IMP4Q96G21 291 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 NUSAP1Q9BXS6 441 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 USE1Q9NZ43 259 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PFDN6O15212 129 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 NDUFS2O75306 463 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 CNTN5O94779 1100 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ANXA6P08133 673 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PCNAP12004 261 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SULT1C3Q6IMI6 304 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 DLEU7Q6UYE1 221 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PLEKHG7Q6ZR37 379 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SNX29P2Q8IUI4 249 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SCML4Q8N228 414 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 NODALQ96S42 347 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 TMEM209Q96SK2 561 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SMURF2Q9HAU4 748 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PAK1IP1Q9NWT1 392 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PCDHGB1Q9Y5G3 927 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SNX5Q9Y5X3 404 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 CXCL11O14625 94 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 TOR1BO14657 336 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SLC22A1O15245 554 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PEX11BO96011 259 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SMPD1P17405 629 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 AGXTP21549 392 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ISL1P61371 349 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 CHRNB3Q05901 458 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 UBXN11Q5T124 520 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ZFAND4Q86XD8 727 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SEMA4BQ9NPR2 832 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SCUBE2Q9NQ36 999 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SUN2Q9UH99 717 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 PTCH2Q9Y6C5 1203 aa13.86□□□□□ -0.19
SCNN1A-201ENST00000228916 SLC1A7O00341 560 aa13.85□□□□□ -0.19
SCNN1A-201ENST00000228916 KERAO60938 352 aa13.85□□□□□ -0.19
SCNN1A-201ENST00000228916 EIF2S1P05198 315 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-201ENST00000228916 RPS17P08708 135 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-201ENST00000228916 BMP4P12644 408 aa13.85□□□□□ -0.19
SCNN1A-201ENST00000228916 GGT1P19440 569 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms