RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TMEM125Q96AQ2 219 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 LRCH3Q96II8 777 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PRPF18Q99633 342 aaKnown RBP21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 SLC30A3Q99726 388 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PNPLA3Q9NST1 481 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PTTG2Q9NZH5 202 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 DHRS7Q9Y394 339 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PKP3Q9Y446 797 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 TIMM22Q9Y584 194 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 A0A1B0GTL3 188 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 TIPRLO75663 272 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 C7P10643 843 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 UMPSP11172 480 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 CHRM3P20309 590 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 HK3P52790 923 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 MAP7Q14244 749 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PCBP2Q15366 365 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 SLC5A9Q2M3M2 681 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PITRM1Q5JRX3 1037 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 CAMK1DQ8IU85 385 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 TMEM199Q8N511 208 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 RAET1EQ8TD07 263 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 SLC29A1Q99808 456 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 ANKRD60Q9BZ19 345 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 MAGEE1Q9HCI5 957 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 GKN1Q9NS71 199 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 IL17CQ9P0M4 197 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 SUN2Q9UH99 717 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PCDHGB4Q9UN71 923 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 RNF11Q9Y3C5 154 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 PCDHGB5Q9Y5G0 923 aa21.76■■□□□ 1.07
SMARCD2-201ENST00000225742 ARHGAP10A1A4S6 786 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 IFRD1O00458 451 aaPredicted RBP21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 E2F3O00716 465 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 HTRA2O43464 458 aaPredicted RBP21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 FZD6O60353 706 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 OR1I1O60431 355 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 CD160O95971 181 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 FASP25445 335 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 AGTR2P50052 363 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 POLR2JP52435 117 aaKnown RBP21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 DIO3P55073 304 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 GK3PQ14409 553 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 NADK2Q4G0N4 442 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 AASDHQ4L235 1098 aaPredicted RBP21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 TPGS2Q68CL5 300 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 TAS2R42Q7RTR8 314 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 ADAMTSL2Q86TH1 951 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 AGPAT4Q9NRZ5 378 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 ZNF225Q9UK10 706 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 DMTF1Q9Y222 760 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 SLC30A1Q9Y6M5 507 aa21.75■■□□□ 1.07
SMARCD2-201ENST00000225742 CCDC154A6NI56 674 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 TSPAN3O60637 253 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 RPS3P23396 243 aaKnown RBP eCLIP21.74■■□□□ 1.071e-9■■□□□ 13.8
SMARCD2-201ENST00000225742 ZFP36L2P47974 494 aaKnown RBP21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 CLCN7P51798 805 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 ECT2LQ008S8 904 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 RBM44Q6ZP01 1051 aaKnown RBP21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 C16orf59Q7L2K0 433 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 CPNE9Q8IYJ1 553 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 REM2Q8IYK8 340 aaPredicted RBP21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 RNF168Q8IYW5 571 aaPredicted RBP21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 CIB1Q99828 191 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 TMEM79Q9BSE2 394 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 C9orf16Q9BUW7 83 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 ZNF711Q9Y462 761 aa21.74■■□□□ 1.07
SMARCD2-201ENST00000225742 NCF1BA6NI72 391 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 NCF1CA8MVU1 366 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 PRMT5O14744 637 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ARPC2O15144 300 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 VILLO15195 856 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ABLIM3O94929 683 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 H6PDO95479 791 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 C1RP00736 705 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 S100BP04271 92 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 NCF1P14598 390 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 AP1S1P61966 158 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 CAPRIN1Q14444 709 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 TGFBIQ15582 683 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 SPPL2CQ8IUH8 684 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 FAM126BQ8IXS8 530 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ADGRG5Q8IZF4 528 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 METTL25Q8N6Q8 603 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 HJURPQ8NCD3 748 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 TRPV3Q8NET8 790 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 HM13Q8TCT9 377 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 CENPNQ96H22 339 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 SMIM14Q96QK8 99 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 RBM38Q9H0Z9 239 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 HMX1Q9NP08 348 aaPredicted RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 HEBP1Q9NRV9 189 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 EIF2B4Q9UI10 523 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 MYRFQ9Y2G1 1151 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 SEC24AO95486 1093 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 PRDX3P30048 256 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 HMGCLP35914 325 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ALDH7A1P49419 539 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 GSK3BP49841 420 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms