RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 GPIP06744 558 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 PRR35P0CG20 571 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 GFAPP14136 432 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 HDCP19113 662 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 CLCQ05315 142 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 PFKFB4Q16877 469 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 HECTD3Q5T447 861 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 PPP2R2DQ66LE6 453 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 BLOC1S3Q6QNY0 202 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 RETREG3Q86VR2 466 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 FBXO39Q8N4B4 442 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 OR9I1Q8NGQ6 314 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 RNF11Q9Y3C5 154 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 ARL5AQ9Y689 179 aa24.7■■□□□ 1.54
RUNDC3A-201ENST00000225441 H3BNH8 94 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 UBXN8O00124 270 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 NR5A2O00482 541 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 CLASP2O75122 1294 aaKnown RBP24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 MLYCDO95822 493 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 RPS17P08708 135 aaKnown RBP24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 TACR2P21452 398 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 ETFBP38117 255 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 RPS6KA2Q15349 733 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 TAF1AQ15573 450 aaPredicted RBP24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 MYLK3Q32MK0 819 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 HMBOX1Q6NT76 420 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 HIC2Q96JB3 615 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 IL21Q9HBE4 155 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 FBRSL1Q9HCM7 1045 aaKnown RBP24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC8A2Q9UPR5 921 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 COMMD10Q9Y6G5 202 aa24.69■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATP6AP2A0A1C7CYW4 349 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 HTRA2O43464 458 aaPredicted RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATP6AP2O75787 350 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 CHEK2O96017 543 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATP5C1P36542 298 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ALDH3B2P48448 385 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ZNF140P52738 457 aaPredicted RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 CDH13P55290 713 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 GEN1Q17RS7 908 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 MTX3Q5HYI7 312 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 PRR23BQ6ZRT6 265 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 RTL10Q7L3V2 364 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 TMEM150AQ86TG1 271 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC15A3Q8IY34 581 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 CHCHD4Q8N4Q1 142 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ZFP28Q8NHY6 868 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 NMD3Q96D46 503 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 MPP4Q96JB8 637 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 GRIP2Q9C0E4 1043 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 TIMMDC1Q9NPL8 285 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ETAA1Q9NY74 926 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 DNMT3LQ9UJW3 386 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 RNF112Q9ULX5 631 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 OAS3Q9Y6K5 1087 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 F5H5T6 163 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 NME4O00746 187 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 RHOBTB1O94844 696 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 F11P03951 625 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 UMPSP11172 480 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 PSMA4P25789 261 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 BMP8BP34820 402 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 PRKCQQ04759 706 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 SEMA3AQ14563 771 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 NHSL2Q5HYW2 709 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 KRT80Q6KB66 452 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 LAYNQ6UX15 382 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 ELMOD1Q8N336 334 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 RYBPQ8N488 228 aaPredicted RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 PPWD1Q96BP3 646 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 TUBGCP3Q96CW5 907 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 LRRC58Q96CX6 371 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 PSKH2Q96QS6 385 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 TMEM79Q9BSE2 394 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 C9orf16Q9BUW7 83 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 SEMA6AQ9H2E6 1030 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 NOL11Q9H8H0 719 aaKnown RBP24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 GPR45Q9Y5Y3 372 aa24.68■■□□□ 1.54
RUNDC3A-201ENST00000225441 CHD9Q3L8U1 2897 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 A0A1W2PP18 115 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 DHRS12A0PJE2 317 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 CCL22O00626 93 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 ASLP04424 464 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 ETS2P15036 469 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 ACVRL1P37023 503 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 GRIA3P42263 894 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 NRF1Q16656 503 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 KCTD21Q4G0X4 260 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 CYP2R1Q6VVX0 501 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 PTRH1Q86Y79 214 aaKnown RBP24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 DDIASQ8IXT1 998 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC22A17Q8WUG5 538 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 CANT1Q8WVQ1 401 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 TFAP2CQ92754 450 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 NACA2Q9H009 215 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 LMAN2LQ9H0V9 348 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC28A3Q9HAS3 691 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC52A3Q9NQ40 469 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 POLG2Q9UHN1 485 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 PCDHGB4Q9UN71 923 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms