RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PDZD8Q8NEN9 1154 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 UBXN10Q96LJ8 280 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 PPP1R2P1Q96PQ5 205 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 APOL5Q9BWW9 433 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 MTG2Q9H4K7 406 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 MRM3Q9HC36 420 aaKnown RBP9.89□□□□□ -0.83
USP11-201ENST00000218348 TUBA8Q9NY65 449 aaPredicted RBP9.89□□□□□ -0.83
USP11-201ENST00000218348 ASB1Q9Y576 335 aa9.89□□□□□ -0.83
USP11-201ENST00000218348 C1orf232A0A0U1RR37 186 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 ILVBLA1L0T0 632 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TYW5A2RUC4 315 aaKnown RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 KRT87PA6NCN2 255 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TXNDC9O14530 226 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 ABLIM3O94929 683 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CLDN7O95471 211 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 RBP1P09455 135 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 UBTFL6P0CB48 400 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 COL6A2P12110 1019 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CD1DP15813 335 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 ZNF37AP17032 561 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 XRCC1P18887 633 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 LPOP22079 712 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 RXRGP48443 463 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 PRKAA2P54646 552 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 FRG1Q14331 258 aaKnown RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 COL19A1Q14993 1142 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CNPY1Q3B7I2 92 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 UNC50Q53HI1 259 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 FAM45BPQ6NSW5 357 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 FAM45AQ8TCE6 357 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 SPPL3Q8TCT6 385 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 SORCS1Q8WY21 1168 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 EID2BQ96D98 161 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TCEAL4Q96EI5 215 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TRIB3Q96RU7 358 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TTYH1Q9H313 450 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 VCXQ9H320 206 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 PIF1Q9H611 641 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 MAGEC1O60732 1142 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 FGF18O76093 207 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 LRG1P02750 347 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 PPARGP37231 505 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 DPP6P42658 865 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 KPNA2P52292 529 aaKnown RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 PFKPQ01813 784 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 MAP7Q14244 749 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 ACAP2Q15057 778 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 UGT3A1Q6NUS8 523 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 IZUMO2Q6UXV1 221 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CYP2R1Q6VVX0 501 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 RBM23Q86U06 439 aaKnown RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 TSPAN33Q86UF1 283 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 RDH11Q8TC12 318 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 GRIN3AQ8TCU5 1115 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 ADAMTS19Q8TE59 1207 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 SKA2Q8WVK7 121 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 ING5Q8WYH8 240 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 PCDHAC1Q9H158 963 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TPK1Q9H3S4 243 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 GSTO2Q9H4Y5 243 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 NDE1Q9NXR1 346 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 TAS2R13Q9NYV9 303 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CD274Q9NZQ7 290 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CIDEBQ9UHD4 219 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 CD84Q9UIB8 345 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 COLQQ9Y215 455 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 ARIH1Q9Y4X5 557 aaPredicted RBP9.88□□□□□ -0.83
USP11-201ENST00000218348 KNL1Q8NG31 2342 aa9.88□□□□□ -0.83
USP11-201ENST00000218348 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 RGSL1A5PLK6 1076 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 UBDO15205 165 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 TLL1O43897 1013 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 FOXD2O60548 495 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 WFS1O76024 890 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 C8AP07357 584 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 VHLP40337 213 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ACTR3P61158 418 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 MLLT1Q03111 559 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 SMARCB1Q12824 385 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 CCNIQ14094 377 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 GRAMD1BQ3KR37 738 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 CHRDL2Q6WN34 429 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 DET1Q7L5Y6 550 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 CEP70Q8NHQ1 597 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 MRPS31Q92665 395 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 TUBGCP3Q96CW5 907 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 LINGO1Q96FE5 620 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 AARSD1Q9BTE6 412 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 C1orf50Q9BV19 199 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ABCB8Q9NUT2 735 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 SLC30A1Q9Y6M5 507 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 HELZP42694 1942 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 HIDE1A8MVS5 230 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 PER2O15055 1255 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 DNAJA2O60884 412 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms