RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 BRD9Q9H8M2 597 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 PAK6Q9NQU5 681 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-201ENST00000035307 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 TRIM38O00635 465 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 SMAD6O43541 496 aaKnown RBP11.96□□□□□ -0.49
CHPF2-201ENST00000035307 FGF1P05230 155 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 ARSAP15289 507 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 UBE3AQ05086 875 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 MSLNQ13421 630 aaPredicted RBP11.96□□□□□ -0.49
CHPF2-201ENST00000035307 INSCQ1MX18 579 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF284Q2VY69 593 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 RBM44Q6ZP01 1051 aaKnown RBP11.96□□□□□ -0.49
CHPF2-201ENST00000035307 ITFG1Q8TB96 612 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 PCDH12Q9NPG4 1184 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 SORCS3Q9UPU3 1222 aa11.96□□□□□ -0.49
CHPF2-201ENST00000035307 MGAT4DA6NG13 374 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 INSIG1O15503 277 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 MAFKO60675 156 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 T-ENOLP0DO92 83 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 MTHFD1P11586 935 aaKnown RBP11.96□□□□□ -0.5
CHPF2-201ENST00000035307 CYP4B1P13584 511 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 TYRP14679 529 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 ITGAXP20702 1163 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 CHN2P52757 468 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 CDH4P55283 916 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 PAFAH1B3Q15102 231 aaKnown RBP11.96□□□□□ -0.5
CHPF2-201ENST00000035307 PM20D1Q6GTS8 502 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 CRTC3Q6UUV7 619 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 LYSMD3Q7Z3D4 306 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 CEP97Q8IW35 865 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 KXD1Q9BQD3 176 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 SIKE1Q9BRV8 207 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.5
CHPF2-201ENST00000035307 DEC1Q9P2X7 70 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 POLG2Q9UHN1 485 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 VPS51Q9UID3 782 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 PLXNB2O15031 1838 aa11.96□□□□□ -0.5
CHPF2-201ENST00000035307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 WASH3PC4AMC7 463 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 PDLIM1O00151 329 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CDC7O00311 574 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SLC25A14O95258 325 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 HSMCR30P0CW71 290 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 GDF5P43026 501 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 DYNC1I2Q13409 638 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SQLEQ14534 574 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 PARP15Q460N3 678 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 TPGS2Q68CL5 300 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 MAPK15Q8TD08 544 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 TUBGCP5Q96RT8 1024 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 C20orf27Q9GZN8 174 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 NDRG2Q9UN36 371 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 EFCAB14O75071 495 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 NDST3O95803 873 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 HLA-DPA1P20036 260 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CD70P32970 193 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 BMPR1AP36894 532 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CTSOP43234 321 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RGRP47804 291 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 ARSDP51689 593 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SNRPD1P62314 119 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 KIAA1324Q6UXG2 1013 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CYP4V2Q6ZWL3 525 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 TXNDC5Q8NBS9 432 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RTKNQ9BST9 563 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RIBC2Q9H4K1 309 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 OXSMQ9NWU1 459 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 FAM32AQ9Y421 112 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 COPG1Q9Y678 874 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SCN4AP35499 1836 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 DHRS12A0PJE2 317 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 A8MT66 165 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 C5orf58C9J3I9 102 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 MAN1A2O60476 641 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RPP40O75818 363 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CLDN7O95471 211 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 COL6A1P12109 1028 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 IRF8Q02556 426 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 DLG1Q12959 904 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 EMC10Q5UCC4 262 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 P3H2Q8IVL5 708 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 UTP15Q8TED0 518 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 ELMO1Q92556 727 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 MYO19Q96H55 970 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 FAM126AQ9BYI3 521 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 ATP13A3Q9H7F0 1226 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 SIRPGQ9P1W8 387 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 KIAA1522Q9P206 1035 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-201ENST00000035307 GALPQ9UBC7 116 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 TBX21Q9UL17 535 aa11.95□□□□□ -0.5
CHPF2-201ENST00000035307 RAD54BQ9Y620 910 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms