RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 OR1I1O60431 355 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 NOL3O60936 208 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 BCL10O95999 233 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 HTR6P50406 440 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 HK3P52790 923 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 ARSFP54793 590 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 CYP2A13Q16696 494 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 GRAMD4Q6IC98 578 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 FBXL22Q6P050 247 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PTRH1Q86Y79 214 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 UMODL1-AS1Q8N2C9 162 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PARP8Q8N3A8 854 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 FBXO30Q8TB52 745 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 STAG3L4Q8TBR4 150 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 EXOC2Q96KP1 924 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 TFB2MQ9H5Q4 396 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 SARS2Q9NP81 518 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 WARS2Q9UGM6 360 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 LEF1Q9UJU2 399 aaPredicted RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 TOR1BO14657 336 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 EEDO75530 441 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 SOAT2O75908 522 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 MBL2P11226 248 aaPredicted RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 AGXTP21549 392 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PRKACGP22612 351 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 GRK4P32298 578 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 MOGQ16653 247 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 SLC39A12Q504Y0 691 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 C6orf136Q5SQH8 315 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 ENPP6Q6UWR7 440 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 RIMKLAQ8IXN7 391 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 CFAP52Q8N1V2 620 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 SIDT2Q8NBJ9 832 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 PAPD5Q8NDF8 572 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 KIAA1191Q96A73 305 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 CDKN2AIPNLQ96HQ2 116 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PPP1R2P1Q96PQ5 205 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 BDH2Q9BUT1 245 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 ZYG11BQ9C0D3 744 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 TRNAU1APQ9NX07 287 aaKnown RBP13.9□□□□□ -0.18
USH1C-201ENST00000005226 SH3BP1Q9Y3L3 701 aa13.9□□□□□ -0.18
USH1C-201ENST00000005226 PTGES3LE9PB15 166 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 HAS3O00219 553 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 GPR39O43194 453 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 KERAO60938 352 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 NIPSNAP2O75323 286 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 KATNA1O75449 491 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 CAPN15O75808 1086 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 RPP40O75818 363 aaKnown RBP13.89□□□□□ -0.19
USH1C-201ENST00000005226 STC1P52823 247 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 TBX4P57082 545 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 SPCS2Q15005 226 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 NKG7Q16617 165 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 SFRP1Q8N474 314 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PDPRQ8NCN5 879 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 BRI3BPQ8WY22 251 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 FIG4Q92562 907 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 ITCHQ96J02 903 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 ASB2Q96Q27 587 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 AASSQ9UDR5 926 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 SUN2Q9UH99 717 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 IQCF5A8MTL0 148 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 MGEA5O60502 916 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 ADAM23O75077 832 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PIGAP37287 484 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 MTHFRP42898 656 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PLA2G16P53816 162 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 EMX2Q04743 252 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 AQP6Q13520 282 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PTPRNQ16849 979 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 Q6ZSR9 355 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 ZNF683Q8IZ20 524 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 OR4K2Q8NGD2 314 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 RHEBL1Q8TAI7 183 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 OSCP1Q8WVF1 389 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PRDM5Q9NQX1 630 aaPredicted RBP13.89□□□□□ -0.19
USH1C-201ENST00000005226 ZNF639Q9UID6 485 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 PCDHGA8Q9Y5G5 932 aa13.89□□□□□ -0.19
USH1C-201ENST00000005226 MYADML2A6NDP7 307 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PRR35P0CG20 571 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 G6PDP11413 515 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 FSHRP23945 695 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 TTKP33981 857 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PIK3CGP48736 1102 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms