RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Smpd4Q6ZPR5 823 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ckap2lQ7TS74 745 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Q8BGA7 448 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pcdhb7Q8CDY9 829 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrpl47Q8K2Y7 252 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Papd4Q91YI6 484 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Krt5Q922U2 580 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ttc30a1Q99J38 664 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Q99KU6 348 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ttc30bQ9CY00 664 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Lman2Q9DBH5 358 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rsrc1Q9DBU6 334 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sertad3Q9ERC3 197 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gprc5dQ9JIL6 344 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Hey2Q9QUS4 339 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 ClcnkbQ9WUB6 687 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Lzts3A2AHG0 700 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Vmn2r24D3YUI0 854 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Erich1E9PY43 332 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm2237E9Q501 211 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 1700024B05RikE9Q6D7 167 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Olfr596F8VQ26 312 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm3591K7N6X2 186 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tk1P04184 233 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Eno3P21550 434 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gria2P23819 883 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Vps26aP40336 327 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tnfrsf4P47741 272 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pim3P58750 326 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Shox2P70390 331 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Npy2rP97295 381 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gata5P97489 404 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrpl10Q3TBW2 262 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Scrn3Q3TMH2 418 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pnpla1Q3V1D5 599 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 TsnQ62348 228 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Heatr6Q6P1G0 1184 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 IpmkQ7TT16 396 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Klhl29Q80T74 875 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem214Q8BM55 687 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kansl2Q8BQR4 486 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Svs2Q8BS30 375 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gpat3Q8C0N2 438 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Stk-ps2Q8C0V7 499 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Calcoco1Q8CGU1 691 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pkn3Q8K045 878 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mtif3Q9CZD5 276 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Mrpl14Q9D1I6 145 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 SarnpQ9D1J3 210 aaKnown RBP8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cep83Q9D5R3 692 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ptk2bQ9QVP9 1009 aa8.63□□□□□ -1.03
Trim39-201ENSMUST00000042717 Klhl41A2AUC9 606 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Osbpl8B9EJ86 889 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Adamtsl5D3Z689 485 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm7714E9Q079 131 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 C130060K24RikG3UWA8 416 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 P01679 107 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sar1aP36536 198 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Alox12P39655 663 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Igfbp2P47877 305 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rpl36P47964 105 aaKnown RBP8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc8a1P70414 970 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rcn1Q05186 325 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Clec12aQ504P2 267 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Elavl3Q60900 367 aaKnown RBP8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Grid2Q61625 1007 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sema4aQ62178 760 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Stmnd1Q6P3A1 279 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 SyncripQ7TMK9 623 aaKnown RBP8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rspo2Q8BFU0 243 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem184bQ8BG09 407 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pex5lQ8C437 567 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fam149aQ8CFV2 787 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Arfip2Q8K221 341 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Hid1Q8R1F6 788 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 TgdsQ8VDR7 355 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 ClpsQ9CQC2 113 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Q9D112 206 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cdc7Q9Z0H0 564 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc25a14Q9Z2B2 325 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cib2Q9Z309 187 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Chd3B1AR17 2055 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ajm1A2AJA9 974 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Skint11A7XV14 364 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Adh6aE9Q5Z6 375 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ncam2O35136 837 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pias3O54714 628 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Il1aP01582 270 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 F9P16294 471 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Klkb1P26262 638 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pdha2P35487 391 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ap2m1P84091 435 aaKnown RBP8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Dnajb14Q149L6 379 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem65Q4VAE3 234 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Eps15l1Q60902 907 aaKnown RBP8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Olfr735Q7TRM4 354 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ankrd9Q8BH83 326 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 SheQ8BSD5 492 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Usp45Q8K387 813 aa8.62□□□□□ -1.03
Trim39-201ENSMUST00000042717 Foxe1Q8R2I0 371 aa8.62□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms