RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 LTN1O94822 1766 aa22.63■■□□□ 1.21
PHGDH-226ENST00000641756 ZBTB7BO15156 539 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-226ENST00000641756 XPCQ01831 940 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-226ENST00000641756 ZBTB7CA1YPR0 619 aa22.62■■□□□ 1.21
PHGDH-226ENST00000641756 C1orf115Q9H7X2 142 aa22.62■■□□□ 1.21
PHGDH-226ENST00000641756 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
PHGDH-226ENST00000641756 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
PHGDH-226ENST00000641756 API5Q9BZZ5 524 aaKnown RBP22.61■■□□□ 1.21
PHGDH-226ENST00000641756 KIAA0232Q92628 1395 aa22.61■■□□□ 1.21
PHGDH-226ENST00000641756 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
PHGDH-226ENST00000641756 SMC5Q8IY18 1101 aa22.6■■□□□ 1.21
PHGDH-226ENST00000641756 DDRGK1Q96HY6 314 aa22.6■■□□□ 1.21
PHGDH-226ENST00000641756 TSPYL4Q9UJ04 414 aa22.6■■□□□ 1.21
PHGDH-226ENST00000641756 RTL1A6NKG5 1358 aa22.59■■□□□ 1.21
PHGDH-226ENST00000641756 NFAT5O94916 1531 aa22.59■■□□□ 1.21
PHGDH-226ENST00000641756 SEC24BO95487 1268 aa22.58■■□□□ 1.21
PHGDH-226ENST00000641756 IP6K1Q92551 441 aa22.58■■□□□ 1.2
PHGDH-226ENST00000641756 HAP1P54257 671 aaPredicted RBP22.57■■□□□ 1.2
PHGDH-226ENST00000641756 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
PHGDH-226ENST00000641756 CHMP4BQ9H444 224 aaKnown RBP22.56■■□□□ 1.2
PHGDH-226ENST00000641756 LMOD2Q6P5Q4 547 aa22.55■■□□□ 1.2
PHGDH-226ENST00000641756 KCNH5Q8NCM2 988 aa22.54■■□□□ 1.2
PHGDH-226ENST00000641756 HTATSF1O43719 755 aaKnown RBP22.54■■□□□ 1.2
PHGDH-226ENST00000641756 USP19O94966 1318 aa22.53■■□□□ 1.2
PHGDH-226ENST00000641756 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
PHGDH-226ENST00000641756 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
PHGDH-226ENST00000641756 MAP3K5Q99683 1374 aa22.53■■□□□ 1.2
PHGDH-226ENST00000641756 RGS12O14924 1447 aa22.53■■□□□ 1.2
PHGDH-226ENST00000641756 SLC4A3P48751 1232 aa22.52■■□□□ 1.2
PHGDH-226ENST00000641756 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
PHGDH-226ENST00000641756 MSH6P52701 1360 aa22.52■■□□□ 1.2
PHGDH-226ENST00000641756 SLC4A2P04920 1241 aa22.52■■□□□ 1.2
PHGDH-226ENST00000641756 NBR1Q14596 966 aa22.52■■□□□ 1.2
PHGDH-226ENST00000641756 NUCB1Q02818 461 aa22.51■■□□□ 1.19
PHGDH-226ENST00000641756 IL17REQ8NFR9 667 aa22.51■■□□□ 1.19
PHGDH-226ENST00000641756 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
PHGDH-226ENST00000641756 LNPKQ9C0E8 428 aa22.51■■□□□ 1.19
PHGDH-226ENST00000641756 GCP02774 474 aa22.5■■□□□ 1.19
PHGDH-226ENST00000641756 INTS3Q68E01 1043 aaKnown RBP22.49■■□□□ 1.19
PHGDH-226ENST00000641756 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
PHGDH-226ENST00000641756 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
PHGDH-226ENST00000641756 C19orf44Q9H6X5 657 aa22.49■■□□□ 1.19
PHGDH-226ENST00000641756 C1orf167Q5SNV9 1468 aa22.49■■□□□ 1.19
PHGDH-226ENST00000641756 RGPD2P0DJD1 1756 aa22.49■■□□□ 1.19
PHGDH-226ENST00000641756 PTPRCP08575 1304 aa22.48■■□□□ 1.19
PHGDH-226ENST00000641756 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
PHGDH-226ENST00000641756 G2E3Q7L622 706 aa22.48■■□□□ 1.19
PHGDH-226ENST00000641756 TRPM3Q9HCF6 1732 aaPredicted RBP22.47■■□□□ 1.19
PHGDH-226ENST00000641756 ANKRD45Q5TZF3 282 aa22.46■■□□□ 1.19
PHGDH-226ENST00000641756 SLIT3O75094 1523 aa22.46■■□□□ 1.19
PHGDH-226ENST00000641756 ARHGEF25Q86VW2 580 aa22.46■■□□□ 1.19
PHGDH-226ENST00000641756 GCC1Q96CN9 775 aa22.46■■□□□ 1.19
PHGDH-226ENST00000641756 PHRF1Q9P1Y6 1649 aaKnown RBP22.46■■□□□ 1.19
PHGDH-226ENST00000641756 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
PHGDH-226ENST00000641756 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
PHGDH-226ENST00000641756 DAXXQ9UER7 740 aaPredicted RBP22.45■■□□□ 1.18
PHGDH-226ENST00000641756 KIF1AQ12756 1690 aa22.44■■□□□ 1.18
PHGDH-226ENST00000641756 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
PHGDH-226ENST00000641756 STRCP1A6NGW2 1772 aa22.43■■□□□ 1.18
PHGDH-226ENST00000641756 F6X3S4 739 aa22.42■■□□□ 1.18
PHGDH-226ENST00000641756 ATF3P18847 181 aa22.42■■□□□ 1.18
PHGDH-226ENST00000641756 HSPA2P54652 639 aa22.42■■□□□ 1.18
PHGDH-226ENST00000641756 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
PHGDH-226ENST00000641756 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
PHGDH-226ENST00000641756 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
PHGDH-226ENST00000641756 UPF2Q9HAU5 1272 aaKnown RBP22.42■■□□□ 1.18
PHGDH-226ENST00000641756 ANKRD24Q8TF21 1146 aa22.41■■□□□ 1.18
PHGDH-226ENST00000641756 MEIS3Q99687 375 aa22.41■■□□□ 1.18
PHGDH-226ENST00000641756 LGR6Q9HBX8 967 aa22.41■■□□□ 1.18
PHGDH-226ENST00000641756 AXIN2Q9Y2T1 843 aa22.4■■□□□ 1.18
PHGDH-226ENST00000641756 MST1RQ04912 1400 aa22.4■■□□□ 1.18
PHGDH-226ENST00000641756 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.18
PHGDH-226ENST00000641756 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.17
PHGDH-226ENST00000641756 ATP10DQ9P241 1426 aa22.39■■□□□ 1.17
PHGDH-226ENST00000641756 CEMIPQ8WUJ3 1361 aa22.38■■□□□ 1.17
PHGDH-226ENST00000641756 ZNF530Q6P9A1 599 aaPredicted RBP22.38■■□□□ 1.17
PHGDH-226ENST00000641756 TBC1D32Q96NH3 1257 aa22.38■■□□□ 1.17
PHGDH-226ENST00000641756 BABAM1Q9NWV8 329 aa22.38■■□□□ 1.17
PHGDH-226ENST00000641756 ZC3H6P61129 1189 aaKnown RBP22.37■■□□□ 1.17
PHGDH-226ENST00000641756 ANKRD44Q8N8A2 993 aa22.37■■□□□ 1.17
PHGDH-226ENST00000641756 CEP85Q6P2H3 762 aa22.37■■□□□ 1.17
PHGDH-226ENST00000641756 MFAP1P55081 439 aaKnown RBP22.36■■□□□ 1.17
PHGDH-226ENST00000641756 FLIIQ13045 1269 aa22.36■■□□□ 1.17
PHGDH-226ENST00000641756 PLEKHO1Q53GL0 409 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-226ENST00000641756 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
PHGDH-226ENST00000641756 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
PHGDH-226ENST00000641756 FKBP5Q13451 457 aaPredicted RBP22.35■■□□□ 1.17
PHGDH-226ENST00000641756 AKAP4Q5JQC9 854 aa22.35■■□□□ 1.17
PHGDH-226ENST00000641756 MPRIPQ6WCQ1 1025 aa22.35■■□□□ 1.17
PHGDH-226ENST00000641756 DCTPP1Q9H773 170 aa22.35■■□□□ 1.17
PHGDH-226ENST00000641756 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
PHGDH-226ENST00000641756 CCT4P50991 539 aaKnown RBP22.34■■□□□ 1.17
PHGDH-226ENST00000641756 RPAP2Q8IXW5 612 aaPredicted RBP22.34■■□□□ 1.17
PHGDH-226ENST00000641756 PXDNQ92626 1479 aa22.34■■□□□ 1.17
PHGDH-226ENST00000641756 MED1Q15648 1581 aaPredicted RBP22.34■■□□□ 1.17
PHGDH-226ENST00000641756 LMO7Q8WWI1 1683 aa22.34■■□□□ 1.17
PHGDH-226ENST00000641756 NCAPD2Q15021 1401 aa22.33■■□□□ 1.16
PHGDH-226ENST00000641756 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.16
PHGDH-226ENST00000641756 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
PHGDH-226ENST00000641756 KCNQ3O43525 872 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms