RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 CHL1O00533 1208 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 PTPRCP08575 1304 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
SAMMSON-218ENST00000641601 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
SAMMSON-218ENST00000641601 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
SAMMSON-218ENST00000641601 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
SAMMSON-218ENST00000641601 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
SAMMSON-218ENST00000641601 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
SAMMSON-218ENST00000641601 RABEP1Q15276 862 aa12.56□□□□□ -0.4
SAMMSON-218ENST00000641601 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
SAMMSON-218ENST00000641601 TTC21BQ7Z4L5 1316 aa12.56□□□□□ -0.4
SAMMSON-218ENST00000641601 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
SAMMSON-218ENST00000641601 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 HSP90AA1P07900 732 aaKnown RBP12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 USP6P35125 1406 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 CRB1P82279 1406 aa12.55□□□□□ -0.4
SAMMSON-218ENST00000641601 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 MSH6P52701 1360 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 TNRQ92752 1358 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
SAMMSON-218ENST00000641601 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 HSPA2P54652 639 aa12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
SAMMSON-218ENST00000641601 CLCN1P35523 988 aa12.52□□□□□ -0.41
SAMMSON-218ENST00000641601 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
SAMMSON-218ENST00000641601 ACEP12821 1306 aa12.52□□□□□ -0.41
SAMMSON-218ENST00000641601 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
SAMMSON-218ENST00000641601 PLEKHG1Q9ULL1 1385 aa12.51□□□□□ -0.41
SAMMSON-218ENST00000641601 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
SAMMSON-218ENST00000641601 HMMRO75330 724 aa12.51□□□□□ -0.41
SAMMSON-218ENST00000641601 NUCB2P80303 420 aa12.51□□□□□ -0.41
SAMMSON-218ENST00000641601 TUBGCP6Q96RT7 1819 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 SDSP20132 328 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 SSFA2P28290 1259 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 MCM10Q7L590 875 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 ARXQ96QS3 562 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 KDRP35968 1356 aa12.5□□□□□ -0.41
SAMMSON-218ENST00000641601 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
SAMMSON-218ENST00000641601 REC8O95072 547 aa12.49□□□□□ -0.41
SAMMSON-218ENST00000641601 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
SAMMSON-218ENST00000641601 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
SAMMSON-218ENST00000641601 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 MEIS3Q99687 375 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 ST18O60284 1047 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 GAS2L3Q86XJ1 694 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 FLT4P35916 1363 aa12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
SAMMSON-218ENST00000641601 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
SAMMSON-218ENST00000641601 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
SAMMSON-218ENST00000641601 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
SAMMSON-218ENST00000641601 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
SAMMSON-218ENST00000641601 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.41
SAMMSON-218ENST00000641601 ERC2O15083 957 aa12.46□□□□□ -0.41
SAMMSON-218ENST00000641601 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
SAMMSON-218ENST00000641601 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.42
SAMMSON-218ENST00000641601 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.42
SAMMSON-218ENST00000641601 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
SAMMSON-218ENST00000641601 ESPNB1AK53 854 aa12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 GNAI2P04899 355 aa12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 PDE1AP54750 535 aa12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 ZNF445P59923 1031 aa12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 PXDNLA1KZ92 1463 aa12.44□□□□□ -0.42
SAMMSON-218ENST00000641601 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms