RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
MACF1-234ENST00000641012 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.27
MACF1-234ENST00000641012 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.27
MACF1-234ENST00000641012 KIF3AQ9Y496 699 aa13.33□□□□□ -0.27
MACF1-234ENST00000641012 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
MACF1-234ENST00000641012 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 METP08581 1390 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 ATP5J2-PTCD1G3V325 749 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 MARCH6O60337 910 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
MACF1-234ENST00000641012 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
MACF1-234ENST00000641012 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
MACF1-234ENST00000641012 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
MACF1-234ENST00000641012 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
MACF1-234ENST00000641012 A0A087WZG4 1122 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 FLIIQ13045 1269 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 FAM184AQ8NB25 1140 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 DNAAF4Q8WXU2 420 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
MACF1-234ENST00000641012 RFC4P35249 363 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
MACF1-234ENST00000641012 CNTROBQ8N137 903 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
MACF1-234ENST00000641012 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 EXOC6BQ9Y2D4 811 aa13.32□□□□□ -0.28
MACF1-234ENST00000641012 CPLX1O14810 134 aa13.31□□□□□ -0.28
MACF1-234ENST00000641012 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
MACF1-234ENST00000641012 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
MACF1-234ENST00000641012 MTMR7Q9Y216 660 aa13.31□□□□□ -0.28
MACF1-234ENST00000641012 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
MACF1-234ENST00000641012 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
MACF1-234ENST00000641012 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
MACF1-234ENST00000641012 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
MACF1-234ENST00000641012 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
MACF1-234ENST00000641012 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
MACF1-234ENST00000641012 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 HTATSF1O43719 755 aaKnown RBP13.3□□□□□ -0.28
MACF1-234ENST00000641012 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
MACF1-234ENST00000641012 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
MACF1-234ENST00000641012 AACSQ86V21 672 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 KDM6BO15054 1643 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
MACF1-234ENST00000641012 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
MACF1-234ENST00000641012 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 EIF2AK4Q9P2K8 1649 aaKnown RBP13.29□□□□□ -0.28
MACF1-234ENST00000641012 ERICH2A1L162 156 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 H3BQV1 296 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
MACF1-234ENST00000641012 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
MACF1-234ENST00000641012 HECW2Q9P2P5 1572 aa13.29□□□□□ -0.28
MACF1-234ENST00000641012 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
MACF1-234ENST00000641012 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
MACF1-234ENST00000641012 USP21Q9UK80 565 aa13.28□□□□□ -0.28
MACF1-234ENST00000641012 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
MACF1-234ENST00000641012 IFIT5Q13325 482 aaKnown RBP13.28□□□□□ -0.28
MACF1-234ENST00000641012 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
MACF1-234ENST00000641012 ABCF2Q9UG63 623 aa13.28□□□□□ -0.28
MACF1-234ENST00000641012 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
MACF1-234ENST00000641012 SLC4A3P48751 1232 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 MCTP1Q6DN14 999 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 CDC45O75419 566 aa13.27□□□□□ -0.28
MACF1-234ENST00000641012 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
MACF1-234ENST00000641012 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.29
MACF1-234ENST00000641012 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
MACF1-234ENST00000641012 MAP4K4O95819 1239 aaPredicted RBP13.27□□□□□ -0.29
MACF1-234ENST00000641012 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
MACF1-234ENST00000641012 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
MACF1-234ENST00000641012 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
MACF1-234ENST00000641012 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
MACF1-234ENST00000641012 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
MACF1-234ENST00000641012 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
MACF1-234ENST00000641012 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
MACF1-234ENST00000641012 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
MACF1-234ENST00000641012 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
MACF1-234ENST00000641012 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
MACF1-234ENST00000641012 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
MACF1-234ENST00000641012 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms