RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
GFAP-238ENST00000640859 TNNQ9UQP3 1299 aa14.47□□□□□ -0.09
GFAP-238ENST00000640859 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
GFAP-238ENST00000640859 COL16A1Q07092 1604 aaPredicted RBP14.46□□□□□ -0.09
GFAP-238ENST00000640859 GNAI1P63096 354 aa14.46□□□□□ -0.09
GFAP-238ENST00000640859 ZKSCAN2Q63HK3 967 aa14.46□□□□□ -0.09
GFAP-238ENST00000640859 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
GFAP-238ENST00000640859 THUMPD2Q9BTF0 503 aaKnown RBP14.46□□□□□ -0.09
GFAP-238ENST00000640859 ALDH1L2Q3SY69 923 aa14.45□□□□□ -0.1
GFAP-238ENST00000640859 CLUAP1Q96AJ1 413 aa14.45□□□□□ -0.1
GFAP-238ENST00000640859 ZNF428Q96B54 188 aa14.45□□□□□ -0.1
GFAP-238ENST00000640859 SOX12O15370 315 aa14.44□□□□□ -0.1
GFAP-238ENST00000640859 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
GFAP-238ENST00000640859 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
GFAP-238ENST00000640859 SMC4Q9NTJ3 1288 aa14.44□□□□□ -0.1
GFAP-238ENST00000640859 AMPHP49418 695 aa14.43□□□□□ -0.1
GFAP-238ENST00000640859 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
GFAP-238ENST00000640859 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
GFAP-238ENST00000640859 VAMP4O75379 141 aa14.42□□□□□ -0.1
GFAP-238ENST00000640859 IGHDP01880 384 aa14.42□□□□□ -0.1
GFAP-238ENST00000640859 MVPQ14764 893 aaKnown RBP14.42□□□□□ -0.1
GFAP-238ENST00000640859 MBIPQ9NS73 344 aa14.42□□□□□ -0.1
GFAP-238ENST00000640859 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
GFAP-238ENST00000640859 KDRP35968 1356 aa14.42□□□□□ -0.1
GFAP-238ENST00000640859 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 HOXC9P31274 260 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 NUTM2GQ5VZR2 741 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 KCNH5Q8NCM2 988 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 EYA1Q99502 592 aa14.41□□□□□ -0.1
GFAP-238ENST00000640859 NOB1Q9ULX3 412 aaKnown RBP14.41□□□□□ -0.1
GFAP-238ENST00000640859 FAM83GA6ND36 823 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 ADAMTS2O95450 1211 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 TRIM27P14373 513 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 PDE4AP27815 886 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 SKAP1Q86WV1 359 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 KIF16BQ96L93 1317 aa14.4□□□□□ -0.1
GFAP-238ENST00000640859 RTL1A6NKG5 1358 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
GFAP-238ENST00000640859 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 MRPL50Q8N5N7 158 aaKnown RBP14.39□□□□□ -0.11
GFAP-238ENST00000640859 TSPYL6Q8N831 410 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 NGLY1Q96IV0 654 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 NFAT5O94916 1531 aa14.39□□□□□ -0.11
GFAP-238ENST00000640859 LTN1O94822 1766 aa14.38□□□□□ -0.11
GFAP-238ENST00000640859 CHL1O00533 1208 aa14.38□□□□□ -0.11
GFAP-238ENST00000640859 MTHFSDQ2M296 383 aaKnown RBP14.37□□□□□ -0.11
GFAP-238ENST00000640859 FTSJ3Q8IY81 847 aaKnown RBP14.37□□□□□ -0.11
GFAP-238ENST00000640859 C8orf58Q8NAV2 365 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 CABLES1Q8TDN4 633 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 C8orf37Q96NL8 207 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 CRB1P82279 1406 aa14.37□□□□□ -0.11
GFAP-238ENST00000640859 PHRF1Q9P1Y6 1649 aaKnown RBP14.37□□□□□ -0.11
GFAP-238ENST00000640859 TRPM3Q9HCF6 1732 aaPredicted RBP14.36□□□□□ -0.11
GFAP-238ENST00000640859 ZNF772Q68DY9 489 aaPredicted RBP14.36□□□□□ -0.11
GFAP-238ENST00000640859 IP6K1Q92551 441 aa14.36□□□□□ -0.11
GFAP-238ENST00000640859 GCP02774 474 aa14.35□□□□□ -0.11
GFAP-238ENST00000640859 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
GFAP-238ENST00000640859 TMEM57Q8N5G2 664 aa14.35□□□□□ -0.11
GFAP-238ENST00000640859 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
GFAP-238ENST00000640859 SLIT3O75094 1523 aa14.35□□□□□ -0.11
GFAP-238ENST00000640859 COL22A1Q8NFW1 1626 aaPredicted RBP14.34□□□□□ -0.11
GFAP-238ENST00000640859 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
GFAP-238ENST00000640859 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
GFAP-238ENST00000640859 MCM10Q7L590 875 aa14.34□□□□□ -0.11
GFAP-238ENST00000640859 GAS2L2Q8NHY3 880 aa14.34□□□□□ -0.11
GFAP-238ENST00000640859 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
GFAP-238ENST00000640859 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
GFAP-238ENST00000640859 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
GFAP-238ENST00000640859 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
GFAP-238ENST00000640859 USP19O94966 1318 aa14.33□□□□□ -0.12
GFAP-238ENST00000640859 MED1Q15648 1581 aaPredicted RBP14.32□□□□□ -0.12
GFAP-238ENST00000640859 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
GFAP-238ENST00000640859 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
GFAP-238ENST00000640859 LRRC37A3O60309 1634 aa14.31□□□□□ -0.12
GFAP-238ENST00000640859 ALS2Q96Q42 1657 aa14.31□□□□□ -0.12
GFAP-238ENST00000640859 EVA1CP58658 441 aa14.31□□□□□ -0.12
GFAP-238ENST00000640859 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
GFAP-238ENST00000640859 USP21Q9UK80 565 aa14.31□□□□□ -0.12
GFAP-238ENST00000640859 HDAC1Q13547 482 aaPredicted RBP14.3□□□□□ -0.12
GFAP-238ENST00000640859 POLA2Q14181 598 aa14.3□□□□□ -0.12
GFAP-238ENST00000640859 ARHGEF25Q86VW2 580 aa14.3□□□□□ -0.12
GFAP-238ENST00000640859 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
GFAP-238ENST00000640859 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
GFAP-238ENST00000640859 AFF2P51816 1311 aa14.3□□□□□ -0.12
GFAP-238ENST00000640859 RGS3P49796 1198 aa14.29□□□□□ -0.12
GFAP-238ENST00000640859 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
GFAP-238ENST00000640859 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
GFAP-238ENST00000640859 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
GFAP-238ENST00000640859 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
GFAP-238ENST00000640859 ABCC4O15439 1325 aa14.29□□□□□ -0.12
GFAP-238ENST00000640859 CPDO75976 1380 aa14.29□□□□□ -0.12
GFAP-238ENST00000640859 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
GFAP-238ENST00000640859 LRP6O75581 1613 aa14.28□□□□□ -0.12
GFAP-238ENST00000640859 RGPD2P0DJD1 1756 aa14.28□□□□□ -0.12
GFAP-238ENST00000640859 KRT24Q2M2I5 525 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms