RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FLIIQ13045 1269 aa21.03■□□□□ 0.96
SCARB2-223ENST00000640640 PTPRCP08575 1304 aa21.03■□□□□ 0.96
SCARB2-223ENST00000640640 TPM3P06753 285 aa21.03■□□□□ 0.96
SCARB2-223ENST00000640640 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
SCARB2-223ENST00000640640 TTC39AQ5SRH9 613 aa21.02■□□□□ 0.96
SCARB2-223ENST00000640640 SDF4Q9BRK5 362 aa21.02■□□□□ 0.96
SCARB2-223ENST00000640640 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
SCARB2-223ENST00000640640 HOOK1Q9UJC3 728 aaKnown RBP21.02■□□□□ 0.96
SCARB2-223ENST00000640640 MAGI3Q5TCQ9 1506 aa21.02■□□□□ 0.95
SCARB2-223ENST00000640640 RAD21O60216 631 aa21.01■□□□□ 0.95
SCARB2-223ENST00000640640 LARP1Q6PKG0 1096 aaKnown RBP21.01■□□□□ 0.95
SCARB2-223ENST00000640640 POLKQ9UBT6 870 aa21.01■□□□□ 0.95
SCARB2-223ENST00000640640 WDR33Q9C0J8 1336 aaKnown RBP21.01■□□□□ 0.95
SCARB2-223ENST00000640640 PIK3C2GO75747 1445 aa21.01■□□□□ 0.95
SCARB2-223ENST00000640640 PTCD1O75127 700 aaKnown RBP21■□□□□ 0.95
SCARB2-223ENST00000640640 BLOC1S2Q6QNY1 142 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 DNAAF4Q8WXU2 420 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 GLRX3O76003 335 aaKnown RBP21■□□□□ 0.95
SCARB2-223ENST00000640640 ANKRD1Q15327 319 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 FBXW7Q969H0 707 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 FAM43AQ8N2R8 423 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
SCARB2-223ENST00000640640 LRRFIP2Q9Y608 721 aaKnown RBP21■□□□□ 0.95
SCARB2-223ENST00000640640 PLEKHH1Q9ULM0 1364 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 RAB11FIP3O75154 756 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 SART3Q15020 963 aaKnown RBP21■□□□□ 0.95
SCARB2-223ENST00000640640 RIMS2Q9UQ26 1411 aa21■□□□□ 0.95
SCARB2-223ENST00000640640 COL17A1Q9UMD9 1497 aaPredicted RBP20.99■□□□□ 0.95
SCARB2-223ENST00000640640 TSR1Q2NL82 804 aaKnown RBP20.99■□□□□ 0.95
SCARB2-223ENST00000640640 TPM1P09493 284 aa20.98■□□□□ 0.95
SCARB2-223ENST00000640640 BRPF3Q9ULD4 1205 aa20.98■□□□□ 0.95
SCARB2-223ENST00000640640 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
SCARB2-223ENST00000640640 JAKMIP1Q96N16 626 aaKnown RBP20.98■□□□□ 0.95
SCARB2-223ENST00000640640 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.98■□□□□ 0.95
SCARB2-223ENST00000640640 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
SCARB2-223ENST00000640640 FKBP4Q02790 459 aaKnown RBP eCLIP20.97■□□□□ 0.95
SCARB2-223ENST00000640640 STK3Q13188 491 aa20.97■□□□□ 0.95
SCARB2-223ENST00000640640 UPF3BQ9BZI7 483 aaKnown RBP20.97■□□□□ 0.95
SCARB2-223ENST00000640640 BMP2KLQ5H9B9 411 aa20.97■□□□□ 0.95
SCARB2-223ENST00000640640 TRIM34Q9BYJ4 488 aa20.96■□□□□ 0.95
SCARB2-223ENST00000640640 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
SCARB2-223ENST00000640640 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
SCARB2-223ENST00000640640 MPHOSPH8Q99549 860 aa20.96■□□□□ 0.95
SCARB2-223ENST00000640640 TTC21AQ8NDW8 1320 aa20.96■□□□□ 0.95
SCARB2-223ENST00000640640 LARP1BQ659C4 914 aaKnown RBP20.95■□□□□ 0.94
SCARB2-223ENST00000640640 TBC1D2Q9BYX2 928 aa20.95■□□□□ 0.94
SCARB2-223ENST00000640640 ZNF592Q92610 1267 aa20.95■□□□□ 0.94
SCARB2-223ENST00000640640 LETM1O95202 739 aaPredicted RBP20.95■□□□□ 0.94
SCARB2-223ENST00000640640 XBP1P17861 261 aa20.95■□□□□ 0.94
SCARB2-223ENST00000640640 HDAC1Q13547 482 aaPredicted RBP20.95■□□□□ 0.94
SCARB2-223ENST00000640640 RRP12Q5JTH9 1297 aaKnown RBP20.95■□□□□ 0.94
SCARB2-223ENST00000640640 KRT28Q7Z3Y7 464 aa20.95■□□□□ 0.94
SCARB2-223ENST00000640640 NUTM2BA6NNL0 878 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-223ENST00000640640 NUTM2EB1AL46 878 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-223ENST00000640640 KINO60870 393 aaKnown RBP20.94■□□□□ 0.94
SCARB2-223ENST00000640640 NUTM2AQ8IVF1 878 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-223ENST00000640640 CCDC85AQ96PX6 553 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-223ENST00000640640 PDRG1Q9NUG6 133 aa20.94■□□□□ 0.94
SCARB2-223ENST00000640640 KDM4AO75164 1064 aa20.93■□□□□ 0.94
SCARB2-223ENST00000640640 HSP90AA2PQ14568 343 aaPredicted RBP20.93■□□□□ 0.94
SCARB2-223ENST00000640640 ANKRD20A12PQ8NF67 263 aa20.93■□□□□ 0.94
SCARB2-223ENST00000640640 CCDC47Q96A33 483 aaKnown RBP20.93■□□□□ 0.94
SCARB2-223ENST00000640640 MYD88Q99836 296 aa20.93■□□□□ 0.94
SCARB2-223ENST00000640640 A0A1W2PP64 1363 aa20.93■□□□□ 0.94
SCARB2-223ENST00000640640 TSPY26PQ9H489 355 aa20.93■□□□□ 0.94
SCARB2-223ENST00000640640 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
SCARB2-223ENST00000640640 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
SCARB2-223ENST00000640640 CEBPZQ03701 1054 aaKnown RBP20.92■□□□□ 0.94
SCARB2-223ENST00000640640 STARD3NLO95772 234 aa20.92■□□□□ 0.94
SCARB2-223ENST00000640640 KRT85P78386 507 aa20.92■□□□□ 0.94
SCARB2-223ENST00000640640 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
SCARB2-223ENST00000640640 ATP2B1P20020 1258 aa20.92■□□□□ 0.94
SCARB2-223ENST00000640640 KRT32Q14532 448 aa20.92■□□□□ 0.94
SCARB2-223ENST00000640640 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.92■□□□□ 0.94
SCARB2-223ENST00000640640 TPM2P07951 284 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 C8orf58Q8NAV2 365 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
SCARB2-223ENST00000640640 BOLA2Q9H3K6 86 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
SCARB2-223ENST00000640640 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 NAT10Q9H0A0 1025 aaKnown RBP20.91■□□□□ 0.94
SCARB2-223ENST00000640640 BRMS1Q9HCU9 246 aa20.91■□□□□ 0.94
SCARB2-223ENST00000640640 CASTP20810 708 aaKnown RBP20.9■□□□□ 0.94
SCARB2-223ENST00000640640 NPC1L1Q9UHC9 1359 aa20.9■□□□□ 0.94
SCARB2-223ENST00000640640 STK38Q15208 465 aa20.9■□□□□ 0.94
SCARB2-223ENST00000640640 ZNF396Q96N95 335 aaPredicted RBP20.9■□□□□ 0.94
SCARB2-223ENST00000640640 CCDC39Q9UFE4 941 aa20.9■□□□□ 0.94
SCARB2-223ENST00000640640 TNNQ9UQP3 1299 aa20.89■□□□□ 0.94
SCARB2-223ENST00000640640 ZSCAN25Q6NSZ9 544 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.93
SCARB2-223ENST00000640640 MAST1Q9Y2H9 1570 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 RLBP1P12271 317 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 MEIS3Q99687 375 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 MTMR7Q9Y216 660 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms