RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	RIPK4	P57078	832 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	KIAA1211	Q6ZU35	1233 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	TET3	O43151	1660 aa		10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	FAM98C	Q17RN3	349 aa	Known RBP	10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	MIS18A	Q9NYP9	233 aa		10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	PIK3C2B	O00750	1634 aa		10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	ASXL1	Q8IXJ9	1541 aa		10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	NINL	Q9Y2I6	1382 aa		10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352	NOB1	Q9ULX3	412 aa	Known RBP	10.73	□□□□□ -0.69
CNTN2-231	ENST00000640352		A0A1W2PP64	1363 aa		10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	MVP	Q14764	893 aa	Known RBP	10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	RBM42	Q9BTD8	480 aa	Known RBP	10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	PTPRU	Q92729	1446 aa		10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	ADAMTSL3	P82987	1691 aa		10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	SSH1	Q8WYL5	1049 aa		10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	C3	P01024	1663 aa		10.72	□□□□□ -0.69
CNTN2-231	ENST00000640352	IQGAP3	Q86VI3	1631 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	ADAMTS13	Q76LX8	1427 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	C1orf141	Q5JVX7	400 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	WDR63	Q8IWG1	891 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	KIF16B	Q96L93	1317 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	RERE	Q9P2R6	1566 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	PIK3C2G	O75747	1445 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	TRIM27	P14373	513 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	EIF2S2	P20042	333 aa	Known RBP	10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	TMEM57	Q8N5G2	664 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	ANKRD24	Q8TF21	1146 aa		10.71	□□□□□ -0.69
CNTN2-231	ENST00000640352	SYNM	O15061	1565 aa		10.71	□□□□□ -0.7
CNTN2-231	ENST00000640352	PTCD1	O75127	700 aa	Known RBP	10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	MCC	P23508	829 aa		10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	LMOD3	Q0VAK6	560 aa		10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	MPRIP	Q6WCQ1	1025 aa		10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	TEF	Q10587	303 aa		10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	NOL8	Q76FK4	1167 aa	Known RBP	10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	USP21	Q9UK80	565 aa		10.7	□□□□□ -0.7
CNTN2-231	ENST00000640352	INSR	P06213	1382 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	IRX3	P78415	501 aa	Predicted RBP	10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	MAP3K19	Q56UN5	1328 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	MROH1	Q8NDA8	1641 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	MCTP1	Q6DN14	999 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	WWC3	Q9ULE0	1092 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	UNC13B	O14795	1591 aa		10.69	□□□□□ -0.7
CNTN2-231	ENST00000640352	KCNH5	Q8NCM2	988 aa		10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	SYAP1	Q96A49	352 aa	Predicted RBP	10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	CLCN1	P35523	988 aa		10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	LARP1	Q6PKG0	1096 aa	Known RBP	10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	DRC7	Q8IY82	874 aa		10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	MAP7D2	Q96T17	732 aa		10.68	□□□□□ -0.7
CNTN2-231	ENST00000640352	FAM177B	A6PVY3	158 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	HMMR	O75330	724 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	CAVIN1	Q6NZI2	390 aa	Known RBP	10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	MCM10	Q7L590	875 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	ST18	O60284	1047 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	TAT	P17735	454 aa	Predicted RBP	10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	POLK	Q9UBT6	870 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	ADGRB3	O60242	1522 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	LMTK2	Q8IWU2	1503 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	FAM83G	A6ND36	823 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	CCDC173	Q0VFZ6	552 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	GAS2L3	Q86XJ1	694 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	RNF214	Q8ND24	703 aa		10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	TNPO1	Q92973	898 aa	Known RBP	10.67	□□□□□ -0.7
CNTN2-231	ENST00000640352	QTRT2	Q9H974	415 aa	Known RBP	10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	ISY1	Q9ULR0	285 aa	Known RBP	10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	KIF1B	O60333	1816 aa		10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	CD2BP2	O95400	341 aa	Known RBP	10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	CT47B1	P0C2W7	299 aa	Predicted RBP	10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	CSPP1	Q1MSJ5	1256 aa		10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	KCNQ4	P56696	695 aa		10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	ILDR1	Q86SU0	546 aa	Predicted RBP	10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	PREX1	Q8TCU6	1659 aa		10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	ALK	Q9UM73	1620 aa		10.66	□□□□□ -0.7
CNTN2-231	ENST00000640352	KIAA0232	Q92628	1395 aa		10.65	□□□□□ -0.7
CNTN2-231	ENST00000640352	ATF7IP	Q6VMQ6	1270 aa		10.65	□□□□□ -0.7
CNTN2-231	ENST00000640352	ZFYVE9	O95405	1425 aa		10.65	□□□□□ -0.7
CNTN2-231	ENST00000640352	ADGRL3	Q9HAR2	1447 aa		10.65	□□□□□ -0.7
CNTN2-231	ENST00000640352	SPHKAP	Q2M3C7	1700 aa		10.65	□□□□□ -0.7
CNTN2-231	ENST00000640352	SPATA31D1	Q6ZQQ2	1576 aa		10.65	□□□□□ -0.71
CNTN2-231	ENST00000640352	SLC4A10	Q6U841	1118 aa		10.65	□□□□□ -0.71
CNTN2-231	ENST00000640352	API5	Q9BZZ5	524 aa	Known RBP	10.65	□□□□□ -0.71
CNTN2-231	ENST00000640352	TMPO	P42166	694 aa	Known RBP	10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	CHAMP1	Q96JM3	812 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	ERBB4	Q15303	1308 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	GOLGA6L4	A6NEF3	574 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	OS9	Q13438	667 aa	Predicted RBP	10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	PDCL3	Q9H2J4	239 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	EXOC5	O00471	708 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	CALR	P27797	417 aa	Known RBP	10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	SSFA2	P28290	1259 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	AXIN2	Q9Y2T1	843 aa		10.64	□□□□□ -0.71
CNTN2-231	ENST00000640352	PLEKHG3	A1L390	1219 aa		10.63	□□□□□ -0.71
CNTN2-231	ENST00000640352	PIP4K2A	P48426	406 aa	Predicted RBP	10.63	□□□□□ -0.71
CNTN2-231	ENST00000640352	GNAI1	P63096	354 aa		10.63	□□□□□ -0.71
CNTN2-231	ENST00000640352	ZSCAN30	Q86W11	494 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms