RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 AMPHP49418 695 aa13.08□□□□□ -0.32
TRIO-225ENST00000639876 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
TRIO-225ENST00000639876 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
TRIO-225ENST00000639876 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
TRIO-225ENST00000639876 KCNQ2O43526 872 aa13.06□□□□□ -0.32
TRIO-225ENST00000639876 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
TRIO-225ENST00000639876 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
TRIO-225ENST00000639876 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
TRIO-225ENST00000639876 SLC27A3Q5K4L6 730 aa13.05□□□□□ -0.32
TRIO-225ENST00000639876 HOXC9P31274 260 aa13.04□□□□□ -0.32
TRIO-225ENST00000639876 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
TRIO-225ENST00000639876 FLT4P35916 1363 aa13.04□□□□□ -0.32
TRIO-225ENST00000639876 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
TRIO-225ENST00000639876 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
TRIO-225ENST00000639876 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
TRIO-225ENST00000639876 INSRP06213 1382 aa13.02□□□□□ -0.33
TRIO-225ENST00000639876 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
TRIO-225ENST00000639876 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 BTAF1O14981 1849 aa13.01□□□□□ -0.33
TRIO-225ENST00000639876 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
TRIO-225ENST00000639876 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
TRIO-225ENST00000639876 FYB1O15117 783 aa13□□□□□ -0.33
TRIO-225ENST00000639876 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
TRIO-225ENST00000639876 SLC16A10Q8TF71 515 aa13□□□□□ -0.33
TRIO-225ENST00000639876 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
TRIO-225ENST00000639876 MYOM1P52179 1685 aa12.99□□□□□ -0.33
TRIO-225ENST00000639876 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
TRIO-225ENST00000639876 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
TRIO-225ENST00000639876 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
TRIO-225ENST00000639876 NSD2O96028 1365 aa12.98□□□□□ -0.33
TRIO-225ENST00000639876 NSD3Q9BZ95 1437 aa12.97□□□□□ -0.33
TRIO-225ENST00000639876 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
TRIO-225ENST00000639876 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRIO-225ENST00000639876 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
TRIO-225ENST00000639876 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
TRIO-225ENST00000639876 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
TRIO-225ENST00000639876 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
TRIO-225ENST00000639876 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
TRIO-225ENST00000639876 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
TRIO-225ENST00000639876 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
TRIO-225ENST00000639876 PROM2Q8N271 834 aa12.95□□□□□ -0.34
TRIO-225ENST00000639876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■□□ 14.7
TRIO-225ENST00000639876 MEGF6O75095 1541 aa12.94□□□□□ -0.34
TRIO-225ENST00000639876 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
TRIO-225ENST00000639876 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
TRIO-225ENST00000639876 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
TRIO-225ENST00000639876 LY75O60449 1722 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 POLD1P28340 1107 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
TRIO-225ENST00000639876 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
TRIO-225ENST00000639876 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
TRIO-225ENST00000639876 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
TRIO-225ENST00000639876 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
TRIO-225ENST00000639876 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
TRIO-225ENST00000639876 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
TRIO-225ENST00000639876 CCER1Q8TC90 406 aaPredicted RBP12.91□□□□□ -0.34
TRIO-225ENST00000639876 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
TRIO-225ENST00000639876 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.34
TRIO-225ENST00000639876 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
TRIO-225ENST00000639876 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
TRIO-225ENST00000639876 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
TRIO-225ENST00000639876 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
TRIO-225ENST00000639876 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
TRIO-225ENST00000639876 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
TRIO-225ENST00000639876 YY1P25490 414 aa12.89□□□□□ -0.35
TRIO-225ENST00000639876 PTGER2P43116 358 aa12.89□□□□□ -0.35
TRIO-225ENST00000639876 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■■□□□ 13.2
TRIO-225ENST00000639876 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
TRIO-225ENST00000639876 ARXQ96QS3 562 aa12.89□□□□□ -0.35
TRIO-225ENST00000639876 HAX1O00165 279 aa12.88□□□□□ -0.35
TRIO-225ENST00000639876 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
TRIO-225ENST00000639876 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
TRIO-225ENST00000639876 COL24A1Q17RW2 1714 aa12.87□□□□□ -0.35
TRIO-225ENST00000639876 C5P01031 1676 aa12.86□□□□□ -0.35
TRIO-225ENST00000639876 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
TRIO-225ENST00000639876 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
TRIO-225ENST00000639876 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
TRIO-225ENST00000639876 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
TRIO-225ENST00000639876 LRRC4BQ9NT99 713 aa12.86□□□□□ -0.35
TRIO-225ENST00000639876 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
TRIO-225ENST00000639876 ZNF827Q17R98 1081 aa12.85□□□□□ -0.35
TRIO-225ENST00000639876 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
TRIO-225ENST00000639876 SYT17Q9BSW7 474 aa12.85□□□□□ -0.35
TRIO-225ENST00000639876 FHDC1Q9C0D6 1143 aaPredicted RBP12.85□□□□□ -0.35
TRIO-225ENST00000639876 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
TRIO-225ENST00000639876 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
TRIO-225ENST00000639876 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
TRIO-225ENST00000639876 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
TRIO-225ENST00000639876 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
TRIO-225ENST00000639876 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
TRIO-225ENST00000639876 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
TRIO-225ENST00000639876 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms