RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
TRIM3-215ENST00000639856 GNAI1P63096 354 aa19.27■□□□□ 0.68
TRIM3-215ENST00000639856 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
TRIM3-215ENST00000639856 SSH1Q8WYL5 1049 aa19.27■□□□□ 0.68
TRIM3-215ENST00000639856 C8orf34Q49A92 452 aa19.27■□□□□ 0.67
TRIM3-215ENST00000639856 ARHGEF25Q86VW2 580 aa19.27■□□□□ 0.67
TRIM3-215ENST00000639856 FTSJ3Q8IY81 847 aaKnown RBP19.26■□□□□ 0.67
TRIM3-215ENST00000639856 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
TRIM3-215ENST00000639856 PCDHB15Q9Y5E8 787 aa19.26■□□□□ 0.67
TRIM3-215ENST00000639856 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
TRIM3-215ENST00000639856 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
TRIM3-215ENST00000639856 PXDNQ92626 1479 aa19.25■□□□□ 0.67
TRIM3-215ENST00000639856 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
TRIM3-215ENST00000639856 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
TRIM3-215ENST00000639856 VIRMAQ69YN4 1812 aaKnown RBP19.24■□□□□ 0.67
TRIM3-215ENST00000639856 TRIM27P14373 513 aa19.24■□□□□ 0.67
TRIM3-215ENST00000639856 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
TRIM3-215ENST00000639856 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
TRIM3-215ENST00000639856 LRRC59Q96AG4 307 aaKnown RBP19.23■□□□□ 0.67
TRIM3-215ENST00000639856 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
TRIM3-215ENST00000639856 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
TRIM3-215ENST00000639856 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
TRIM3-215ENST00000639856 ALDH1L2Q3SY69 923 aa19.22■□□□□ 0.67
TRIM3-215ENST00000639856 TNS3Q68CZ2 1445 aa19.22■□□□□ 0.67
TRIM3-215ENST00000639856 ZC3H6P61129 1189 aaKnown RBP19.22■□□□□ 0.67
TRIM3-215ENST00000639856 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
TRIM3-215ENST00000639856 CRB1P82279 1406 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
TRIM3-215ENST00000639856 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 VAMP4O75379 141 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 C8orf58Q8NAV2 365 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 CABLES1Q8TDN4 633 aa19.21■□□□□ 0.67
TRIM3-215ENST00000639856 RWDD1Q9H446 243 aaPredicted RBP19.21■□□□□ 0.67
TRIM3-215ENST00000639856 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
TRIM3-215ENST00000639856 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
TRIM3-215ENST00000639856 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
TRIM3-215ENST00000639856 CHL1O00533 1208 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 BRPF1P55201 1214 aaPredicted RBP19.18■□□□□ 0.66
TRIM3-215ENST00000639856 ANKRD24Q8TF21 1146 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
TRIM3-215ENST00000639856 DDRGK1Q96HY6 314 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 CRYBG1Q9Y4K1 1723 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 SPATA31A3Q5VYP0 1347 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 KRT24Q2M2I5 525 aa19.18■□□□□ 0.66
TRIM3-215ENST00000639856 TWISTNBQ3B726 338 aaPredicted RBP19.18■□□□□ 0.66
TRIM3-215ENST00000639856 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
TRIM3-215ENST00000639856 LRRC37A3O60309 1634 aa19.17■□□□□ 0.66
TRIM3-215ENST00000639856 ITPRIPQ8IWB1 547 aa19.16■□□□□ 0.66
TRIM3-215ENST00000639856 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
TRIM3-215ENST00000639856 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
TRIM3-215ENST00000639856 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
TRIM3-215ENST00000639856 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
TRIM3-215ENST00000639856 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
TRIM3-215ENST00000639856 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
TRIM3-215ENST00000639856 COL18A1P39060 1754 aa19.14■□□□□ 0.65
TRIM3-215ENST00000639856 MRPL50Q8N5N7 158 aaKnown RBP19.13■□□□□ 0.65
TRIM3-215ENST00000639856 IL17REQ8NFR9 667 aa19.13■□□□□ 0.65
TRIM3-215ENST00000639856 ERBB3P21860 1342 aa19.13■□□□□ 0.65
TRIM3-215ENST00000639856 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
TRIM3-215ENST00000639856 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
TRIM3-215ENST00000639856 CHRNA2Q15822 529 aa19.12■□□□□ 0.65
TRIM3-215ENST00000639856 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
TRIM3-215ENST00000639856 TSPYL4Q9UJ04 414 aa19.12■□□□□ 0.65
TRIM3-215ENST00000639856 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
TRIM3-215ENST00000639856 LMO7Q8WWI1 1683 aa19.1■□□□□ 0.65
TRIM3-215ENST00000639856 ARHGAP45Q92619 1136 aa19.1■□□□□ 0.65
TRIM3-215ENST00000639856 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
TRIM3-215ENST00000639856 NBR1Q14596 966 aa19.07■□□□□ 0.64
TRIM3-215ENST00000639856 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
TRIM3-215ENST00000639856 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
TRIM3-215ENST00000639856 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
TRIM3-215ENST00000639856 LGR6Q9HBX8 967 aa19.06■□□□□ 0.64
TRIM3-215ENST00000639856 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
TRIM3-215ENST00000639856 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
TRIM3-215ENST00000639856 SMC5Q8IY18 1101 aa19.06■□□□□ 0.64
TRIM3-215ENST00000639856 CPDO75976 1380 aa19.06■□□□□ 0.64
TRIM3-215ENST00000639856 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
TRIM3-215ENST00000639856 ABCA3Q99758 1704 aa19.05■□□□□ 0.64
TRIM3-215ENST00000639856 BCL11AQ9H165 835 aa19.04■□□□□ 0.64
TRIM3-215ENST00000639856 CHMP4BQ9H444 224 aaKnown RBP19.04■□□□□ 0.64
TRIM3-215ENST00000639856 TAF7Q15545 349 aaPredicted RBP19.04■□□□□ 0.64
TRIM3-215ENST00000639856 ABCC6O95255 1503 aa19.04■□□□□ 0.64
TRIM3-215ENST00000639856 CSB-PGBD3P0DP91 1061 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 AMOTQ4VCS5 1084 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 AKAP4Q5JQC9 854 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 ABCC4O15439 1325 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
TRIM3-215ENST00000639856 SEC24BO95487 1268 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 MPRIPQ6WCQ1 1025 aa19.03■□□□□ 0.64
TRIM3-215ENST00000639856 MEGF6O75095 1541 aa19.01■□□□□ 0.63
TRIM3-215ENST00000639856 HAP1P54257 671 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-215ENST00000639856 PRDM11Q9NQV5 511 aa19.01■□□□□ 0.63
TRIM3-215ENST00000639856 DAXXQ9UER7 740 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-215ENST00000639856 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
TRIM3-215ENST00000639856 API5Q9BZZ5 524 aaKnown RBP19■□□□□ 0.63
TRIM3-215ENST00000639856 RGS12O14924 1447 aa18.99■□□□□ 0.63
TRIM3-215ENST00000639856 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
TRIM3-215ENST00000639856 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
TRIM3-215ENST00000639856 KDM3BQ7LBC6 1761 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms