RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
NECAP1-216ENST00000639167 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
NECAP1-216ENST00000639167 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
NECAP1-216ENST00000639167 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
NECAP1-216ENST00000639167 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 RGS12O14924 1447 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 CRB1P82279 1406 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 EYA1Q99502 592 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
NECAP1-216ENST00000639167 SLIT1O75093 1534 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
NECAP1-216ENST00000639167 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 FLT4P35916 1363 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
NECAP1-216ENST00000639167 NLRP6P59044 892 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
NECAP1-216ENST00000639167 MSH6P52701 1360 aa13.24□□□□□ -0.29
NECAP1-216ENST00000639167 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
NECAP1-216ENST00000639167 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
NECAP1-216ENST00000639167 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
NECAP1-216ENST00000639167 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
NECAP1-216ENST00000639167 KIF24Q5T7B8 1368 aa13.23□□□□□ -0.29
NECAP1-216ENST00000639167 KCNA6P17658 529 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 MEIS3Q99687 375 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
NECAP1-216ENST00000639167 APBB1O00213 710 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 G2E3Q7L622 706 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
NECAP1-216ENST00000639167 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
NECAP1-216ENST00000639167 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
NECAP1-216ENST00000639167 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.29
NECAP1-216ENST00000639167 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
NECAP1-216ENST00000639167 ATP10DQ9P241 1426 aa13.21□□□□□ -0.29
NECAP1-216ENST00000639167 F6X3S4 739 aa13.21□□□□□ -0.3
NECAP1-216ENST00000639167 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.3
NECAP1-216ENST00000639167 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.3
NECAP1-216ENST00000639167 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.3
NECAP1-216ENST00000639167 PTPRCP08575 1304 aa13.21□□□□□ -0.3
NECAP1-216ENST00000639167 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.3
NECAP1-216ENST00000639167 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-216ENST00000639167 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-216ENST00000639167 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 CDC45O75419 566 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 RPAP2Q8IXW5 612 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-216ENST00000639167 KIF2CQ99661 725 aa13.2□□□□□ -0.3
NECAP1-216ENST00000639167 KDRP35968 1356 aa13.19□□□□□ -0.3
NECAP1-216ENST00000639167 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
NECAP1-216ENST00000639167 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
NECAP1-216ENST00000639167 HOXC9P31274 260 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
NECAP1-216ENST00000639167 MCM4P33991 863 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 SNX21Q969T3 373 aa13.18□□□□□ -0.3
NECAP1-216ENST00000639167 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
NECAP1-216ENST00000639167 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
NECAP1-216ENST00000639167 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
NECAP1-216ENST00000639167 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
NECAP1-216ENST00000639167 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
NECAP1-216ENST00000639167 GNAT3A8MTJ3 354 aa13.16□□□□□ -0.3
NECAP1-216ENST00000639167 ANKARQ7Z5J8 1434 aa13.15□□□□□ -0.3
NECAP1-216ENST00000639167 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
NECAP1-216ENST00000639167 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
NECAP1-216ENST00000639167 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
NECAP1-216ENST00000639167 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
NECAP1-216ENST00000639167 DDIT3P35638 169 aa13.14□□□□□ -0.31
NECAP1-216ENST00000639167 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
NECAP1-216ENST00000639167 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
NECAP1-216ENST00000639167 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-216ENST00000639167 FLIIQ13045 1269 aa13.13□□□□□ -0.31
NECAP1-216ENST00000639167 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
NECAP1-216ENST00000639167 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
NECAP1-216ENST00000639167 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
NECAP1-216ENST00000639167 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
NECAP1-216ENST00000639167 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
NECAP1-216ENST00000639167 SDSP20132 328 aa13.13□□□□□ -0.31
NECAP1-216ENST00000639167 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
NECAP1-216ENST00000639167 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
NECAP1-216ENST00000639167 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
NECAP1-216ENST00000639167 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-216ENST00000639167 HMMRO75330 724 aa13.12□□□□□ -0.31
NECAP1-216ENST00000639167 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
NECAP1-216ENST00000639167 EXOC6BQ9Y2D4 811 aa13.11□□□□□ -0.31
NECAP1-216ENST00000639167 TRAK2O60296 914 aa13.11□□□□□ -0.31
NECAP1-216ENST00000639167 GNAI2P04899 355 aa13.11□□□□□ -0.31
NECAP1-216ENST00000639167 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
NECAP1-216ENST00000639167 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
NECAP1-216ENST00000639167 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms