RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
SPIN3-216ENST00000638940 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
SPIN3-216ENST00000638940 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
SPIN3-216ENST00000638940 KIF1AQ12756 1690 aa13.46□□□□□ -0.25
SPIN3-216ENST00000638940 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.26
SPIN3-216ENST00000638940 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
SPIN3-216ENST00000638940 BABAM1Q9NWV8 329 aa13.45□□□□□ -0.26
SPIN3-216ENST00000638940 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
SPIN3-216ENST00000638940 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
SPIN3-216ENST00000638940 MST1RQ04912 1400 aa13.44□□□□□ -0.26
SPIN3-216ENST00000638940 SLIT3O75094 1523 aa13.44□□□□□ -0.26
SPIN3-216ENST00000638940 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
SPIN3-216ENST00000638940 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
SPIN3-216ENST00000638940 PTPRCP08575 1304 aa13.44□□□□□ -0.26
SPIN3-216ENST00000638940 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
SPIN3-216ENST00000638940 CACNA1FO60840 1977 aa13.43□□□□□ -0.26
SPIN3-216ENST00000638940 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
SPIN3-216ENST00000638940 MCM10Q7L590 875 aa13.43□□□□□ -0.26
SPIN3-216ENST00000638940 IP6K1Q92551 441 aa13.43□□□□□ -0.26
SPIN3-216ENST00000638940 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
SPIN3-216ENST00000638940 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
SPIN3-216ENST00000638940 SOX12O15370 315 aa13.42□□□□□ -0.26
SPIN3-216ENST00000638940 NUCB1Q02818 461 aa13.42□□□□□ -0.26
SPIN3-216ENST00000638940 RGS12O14924 1447 aa13.41□□□□□ -0.26
SPIN3-216ENST00000638940 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
SPIN3-216ENST00000638940 USP19O94966 1318 aa13.41□□□□□ -0.26
SPIN3-216ENST00000638940 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-216ENST00000638940 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
SPIN3-216ENST00000638940 GNAT3A8MTJ3 354 aa13.4□□□□□ -0.26
SPIN3-216ENST00000638940 PSME1Q06323 249 aa13.4□□□□□ -0.26
SPIN3-216ENST00000638940 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
SPIN3-216ENST00000638940 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
SPIN3-216ENST00000638940 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
SPIN3-216ENST00000638940 MSH6P52701 1360 aa13.39□□□□□ -0.27
SPIN3-216ENST00000638940 N4BP2Q86UW6 1770 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-216ENST00000638940 FOXO3O43524 673 aa13.38□□□□□ -0.27
SPIN3-216ENST00000638940 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
SPIN3-216ENST00000638940 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-216ENST00000638940 DCCP43146 1447 aa13.38□□□□□ -0.27
SPIN3-216ENST00000638940 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
SPIN3-216ENST00000638940 FAM208AQ9UK61 1670 aaKnown RBP13.38□□□□□ -0.27
SPIN3-216ENST00000638940 LMTK3Q96Q04 1460 aa13.38□□□□□ -0.27
SPIN3-216ENST00000638940 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
SPIN3-216ENST00000638940 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
SPIN3-216ENST00000638940 NBR1Q14596 966 aa13.37□□□□□ -0.27
SPIN3-216ENST00000638940 UPF2Q9HAU5 1272 aaKnown RBP13.37□□□□□ -0.27
SPIN3-216ENST00000638940 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
SPIN3-216ENST00000638940 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
SPIN3-216ENST00000638940 CEMIPQ8WUJ3 1361 aa13.36□□□□□ -0.27
SPIN3-216ENST00000638940 C19orf44Q9H6X5 657 aa13.36□□□□□ -0.27
SPIN3-216ENST00000638940 OVOS2A0A0G2JMS6 1433 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-216ENST00000638940 SEC24BO95487 1268 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 TAF7Q15545 349 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-216ENST00000638940 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-216ENST00000638940 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
SPIN3-216ENST00000638940 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
SPIN3-216ENST00000638940 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
SPIN3-216ENST00000638940 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
SPIN3-216ENST00000638940 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
SPIN3-216ENST00000638940 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
SPIN3-216ENST00000638940 ATP10DQ9P241 1426 aa13.34□□□□□ -0.27
SPIN3-216ENST00000638940 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.27
SPIN3-216ENST00000638940 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.27
SPIN3-216ENST00000638940 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.27
SPIN3-216ENST00000638940 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 ABCC6O95255 1503 aa13.33□□□□□ -0.28
SPIN3-216ENST00000638940 GCP02774 474 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
SPIN3-216ENST00000638940 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 HOXB7P09629 217 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 BECN1Q14457 450 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 AMOTQ4VCS5 1084 aa13.32□□□□□ -0.28
SPIN3-216ENST00000638940 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
SPIN3-216ENST00000638940 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
SPIN3-216ENST00000638940 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
SPIN3-216ENST00000638940 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
SPIN3-216ENST00000638940 ANKRD45Q5TZF3 282 aa13.3□□□□□ -0.28
SPIN3-216ENST00000638940 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
SPIN3-216ENST00000638940 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
SPIN3-216ENST00000638940 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms