RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
MYCN-202ENST00000638417 MAP3K19Q56UN5 1328 aa20.22■□□□□ 0.83
MYCN-202ENST00000638417 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
MYCN-202ENST00000638417 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
MYCN-202ENST00000638417 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
MYCN-202ENST00000638417 LTV1Q96GA3 475 aaPredicted RBP20.21■□□□□ 0.83
MYCN-202ENST00000638417 INSRP06213 1382 aa20.21■□□□□ 0.83
MYCN-202ENST00000638417 SMG6Q86US8 1419 aaKnown RBP20.21■□□□□ 0.83
MYCN-202ENST00000638417 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
MYCN-202ENST00000638417 EXOC5O00471 708 aa20.2■□□□□ 0.82
MYCN-202ENST00000638417 AMPHP49418 695 aa20.2■□□□□ 0.82
MYCN-202ENST00000638417 SBF2Q86WG5 1849 aa20.2■□□□□ 0.82
MYCN-202ENST00000638417 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
MYCN-202ENST00000638417 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
MYCN-202ENST00000638417 RREB1Q92766 1687 aa20.18■□□□□ 0.82
MYCN-202ENST00000638417 HSP90AB2PQ58FF8 381 aa20.17■□□□□ 0.82
MYCN-202ENST00000638417 IP6K1Q92551 441 aa20.17■□□□□ 0.82
MYCN-202ENST00000638417 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
MYCN-202ENST00000638417 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
MYCN-202ENST00000638417 IL13P35225 146 aa20.16■□□□□ 0.82
MYCN-202ENST00000638417 TNS2Q63HR2 1409 aa20.16■□□□□ 0.82
MYCN-202ENST00000638417 IL2RBP14784 551 aa20.15■□□□□ 0.82
MYCN-202ENST00000638417 HOXC9P31274 260 aa20.14■□□□□ 0.81
MYCN-202ENST00000638417 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
MYCN-202ENST00000638417 FLT4P35916 1363 aa20.14■□□□□ 0.81
MYCN-202ENST00000638417 EIF4A2Q14240 407 aaKnown RBP20.13■□□□□ 0.81
MYCN-202ENST00000638417 APAF1O14727 1248 aa20.13■□□□□ 0.81
MYCN-202ENST00000638417 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
MYCN-202ENST00000638417 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
MYCN-202ENST00000638417 ACSBG1Q96GR2 724 aa20.12■□□□□ 0.81
MYCN-202ENST00000638417 LRP5O75197 1615 aa20.12■□□□□ 0.81
MYCN-202ENST00000638417 FAM208AQ9UK61 1670 aaKnown RBP20.11■□□□□ 0.81
MYCN-202ENST00000638417 RGPD2P0DJD1 1756 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 KCNQ2O43526 872 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 HMOX1P09601 288 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 BCL9O00512 1426 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 PLSCR1O15162 318 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 KIF24Q5T7B8 1368 aa20.1■□□□□ 0.81
MYCN-202ENST00000638417 FCHSD2O94868 740 aa20.08■□□□□ 0.81
MYCN-202ENST00000638417 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
MYCN-202ENST00000638417 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.8
MYCN-202ENST00000638417 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.8
MYCN-202ENST00000638417 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
MYCN-202ENST00000638417 RTL1A6NKG5 1358 aa20.07■□□□□ 0.8
MYCN-202ENST00000638417 PLEKHF1Q96S99 279 aa20.07■□□□□ 0.8
MYCN-202ENST00000638417 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
MYCN-202ENST00000638417 NEUROD2Q15784 382 aa20.06■□□□□ 0.8
MYCN-202ENST00000638417 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
MYCN-202ENST00000638417 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
MYCN-202ENST00000638417 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
MYCN-202ENST00000638417 MAPK8IP3Q9UPT6 1336 aa20.06■□□□□ 0.8
MYCN-202ENST00000638417 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
MYCN-202ENST00000638417 PROM2Q8N271 834 aa20.05■□□□□ 0.8
MYCN-202ENST00000638417 SULT6B1Q6IMI4 303 aa20.04■□□□□ 0.8
MYCN-202ENST00000638417 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
MYCN-202ENST00000638417 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
MYCN-202ENST00000638417 NEFMP07197 916 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 EYA1Q99502 592 aa20.03■□□□□ 0.8
MYCN-202ENST00000638417 MEGF6O75095 1541 aa20.02■□□□□ 0.8
MYCN-202ENST00000638417 NGEFQ8N5V2 710 aa20■□□□□ 0.79
MYCN-202ENST00000638417 BTAF1O14981 1849 aa20■□□□□ 0.79
MYCN-202ENST00000638417 PHACTR3Q96KR7 559 aa20■□□□□ 0.79
MYCN-202ENST00000638417 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
MYCN-202ENST00000638417 SYTL4Q96C24 671 aaPredicted RBP19.99■□□□□ 0.79
MYCN-202ENST00000638417 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
MYCN-202ENST00000638417 TMPOP42166 694 aaKnown RBP19.98■□□□□ 0.79
MYCN-202ENST00000638417 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
MYCN-202ENST00000638417 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
MYCN-202ENST00000638417 RAPGEF4Q8WZA2 1011 aa19.97■□□□□ 0.79
MYCN-202ENST00000638417 PDGFDQ9GZP0 370 aaPredicted RBP19.97■□□□□ 0.79
MYCN-202ENST00000638417 WWC1Q8IX03 1113 aa19.97■□□□□ 0.79
MYCN-202ENST00000638417 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
MYCN-202ENST00000638417 ZNF521Q96K83 1311 aa19.96■□□□□ 0.79
MYCN-202ENST00000638417 RIPK4P57078 832 aa19.96■□□□□ 0.79
MYCN-202ENST00000638417 STK32BQ9NY57 414 aa19.96■□□□□ 0.79
MYCN-202ENST00000638417 GOLGA2Q08379 1002 aa19.95■□□□□ 0.78
MYCN-202ENST00000638417 TATP17735 454 aaPredicted RBP19.94■□□□□ 0.78
MYCN-202ENST00000638417 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
MYCN-202ENST00000638417 SPON1Q9HCB6 807 aa19.94■□□□□ 0.78
MYCN-202ENST00000638417 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
MYCN-202ENST00000638417 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
MYCN-202ENST00000638417 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
MYCN-202ENST00000638417 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
MYCN-202ENST00000638417 KDRP35968 1356 aa19.93■□□□□ 0.78
MYCN-202ENST00000638417 ZBTB7AO95365 584 aa19.92■□□□□ 0.78
MYCN-202ENST00000638417 PPP1R1BQ9UD71 204 aaPredicted RBP19.92■□□□□ 0.78
MYCN-202ENST00000638417 CASZ1Q86V15 1759 aa19.92■□□□□ 0.78
MYCN-202ENST00000638417 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
MYCN-202ENST00000638417 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
MYCN-202ENST00000638417 KCNQ4P56696 695 aa19.9■□□□□ 0.78
MYCN-202ENST00000638417 SLFN5Q08AF3 891 aa19.89■□□□□ 0.77
MYCN-202ENST00000638417 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
MYCN-202ENST00000638417 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
MYCN-202ENST00000638417 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
MYCN-202ENST00000638417 PCDH11XQ9BZA7 1347 aa19.88■□□□□ 0.77
MYCN-202ENST00000638417 PCDH11YQ9BZA8 1340 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms