RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 FAM135BQ49AJ0 1406 aa8.15□□□□□ -1.11
SCARB2-207ENST00000638295 FLT4P35916 1363 aa8.15□□□□□ -1.11
SCARB2-207ENST00000638295 KIAA0232Q92628 1395 aa8.15□□□□□ -1.11
SCARB2-207ENST00000638295 ST5P78524 1137 aa8.15□□□□□ -1.11
SCARB2-207ENST00000638295 ERC1Q8IUD2 1116 aa8.15□□□□□ -1.11
SCARB2-207ENST00000638295 MARCH6O60337 910 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 RNF20Q5VTR2 975 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 EIF2AK4Q9P2K8 1649 aaKnown RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 WDHD1O75717 1129 aaPredicted RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 HSP90AB3PQ58FF7 597 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 RPGRQ92834 1020 aaKnown RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
SCARB2-207ENST00000638295 NKTRP30414 1462 aaKnown RBP8.14□□□□□ -1.11
SCARB2-207ENST00000638295 ZKSCAN1P17029 563 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-207ENST00000638295 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-207ENST00000638295 WDR63Q8IWG1 891 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 ANKRD36BQ8N2N9 1353 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 TET3O43151 1660 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 ST18O60284 1047 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 CARD10Q9BWT7 1032 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 INO80Q9ULG1 1556 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-207ENST00000638295 GNPATO15228 680 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-207ENST00000638295 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 CLASRPQ8N2M8 674 aaKnown RBP8.13□□□□□ -1.11
SCARB2-207ENST00000638295 BCL2L13Q9BXK5 485 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 PLEKHH1Q9ULM0 1364 aa8.13□□□□□ -1.11
SCARB2-207ENST00000638295 CLSTN1O94985 981 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 REC8O95072 547 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
SCARB2-207ENST00000638295 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
SCARB2-207ENST00000638295 DCAF5Q96JK2 942 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 SPON1Q9HCB6 807 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 VPS72Q15906 364 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 ZFYVE9O95405 1425 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 KIF13AQ9H1H9 1805 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 KIDINS220Q9ULH0 1771 aa8.12□□□□□ -1.11
SCARB2-207ENST00000638295 ERICH2A1L162 156 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 APPP05067 770 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 NFE2L2Q16236 605 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 RILPL2Q969X0 211 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 TRIM44Q96DX7 344 aaPredicted RBP8.11□□□□□ -1.11
SCARB2-207ENST00000638295 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
SCARB2-207ENST00000638295 BCORL1Q5H9F3 1711 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 FYB1O15117 783 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 HOXC9P31274 260 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 PTMAP06454 111 aaKnown RBP8.11□□□□□ -1.11
SCARB2-207ENST00000638295 MYL6BP14649 208 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
SCARB2-207ENST00000638295 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 MPHOSPH8Q99549 860 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 SBNO1A3KN83 1393 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 MAP3K19Q56UN5 1328 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
SCARB2-207ENST00000638295 NEUROD6Q96NK8 337 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 SRCIN1Q9C0H9 1055 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 CNNM1Q9NRU3 951 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
SCARB2-207ENST00000638295 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-207ENST00000638295 L1TD1Q5T7N2 865 aaKnown RBP8.1□□□□□ -1.11
SCARB2-207ENST00000638295 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 EDC4Q6P2E9 1401 aaKnown RBP8.1□□□□□ -1.11
SCARB2-207ENST00000638295 WDR17Q8IZU2 1322 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-207ENST00000638295 GBP4Q96PP9 640 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 CLEC11AQ9Y240 323 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 TNS3Q68CZ2 1445 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 HIP1O00291 1037 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 SYNMO15061 1565 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 RRP1P56182 461 aaKnown RBP8.1□□□□□ -1.11
SCARB2-207ENST00000638295 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
SCARB2-207ENST00000638295 POLR3AO14802 1390 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-207ENST00000638295 CCDC57Q2TAC2 916 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 CCDC158Q5M9N0 1113 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
SCARB2-207ENST00000638295 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 JDP2Q8WYK2 163 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 FAM83GA6ND36 823 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 AKAP4Q5JQC9 854 aa8.09□□□□□ -1.11
SCARB2-207ENST00000638295 SYAP1Q96A49 352 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-207ENST00000638295 KIF1BO60333 1816 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 GNAI2P04899 355 aa8.08□□□□□ -1.12
SCARB2-207ENST00000638295 SNRPA1P09661 255 aaKnown RBP8.08□□□□□ -1.12
SCARB2-207ENST00000638295 IGHMBP2P38935 993 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms