RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 USP54Q70EL1 1684 aa27.16■■□□□ 1.94
CLN6-224ENST00000638076 C1orf115Q9H7X2 142 aa27.15■■□□□ 1.94
CLN6-224ENST00000638076 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
CLN6-224ENST00000638076 GAS2L2Q8NHY3 880 aa27.15■■□□□ 1.94
CLN6-224ENST00000638076 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
CLN6-224ENST00000638076 MIS18AQ9NYP9 233 aa27.13■■□□□ 1.93
CLN6-224ENST00000638076 NUCB1Q02818 461 aa27.13■■□□□ 1.93
CLN6-224ENST00000638076 NPHP4O75161 1426 aaPredicted RBP27.12■■□□□ 1.93
CLN6-224ENST00000638076 ESCO1Q5FWF5 840 aa27.12■■□□□ 1.93
CLN6-224ENST00000638076 LTV1Q96GA3 475 aaPredicted RBP27.11■■□□□ 1.93
CLN6-224ENST00000638076 TSPYL4Q9UJ04 414 aa27.1■■□□□ 1.93
CLN6-224ENST00000638076 UPF2Q9HAU5 1272 aaKnown RBP27.09■■□□□ 1.93
CLN6-224ENST00000638076 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
CLN6-224ENST00000638076 PSME1Q06323 249 aa27.08■■□□□ 1.93
CLN6-224ENST00000638076 CHD1LQ86WJ1 897 aa27.08■■□□□ 1.93
CLN6-224ENST00000638076 LNPKQ9C0E8 428 aa27.08■■□□□ 1.93
CLN6-224ENST00000638076 GCC1Q96CN9 775 aa27.07■■□□□ 1.92
CLN6-224ENST00000638076 SIRT2Q8IXJ6 389 aa27.07■■□□□ 1.92
CLN6-224ENST00000638076 RTL1A6NKG5 1358 aa27.07■■□□□ 1.92
CLN6-224ENST00000638076 RTL5Q5HYW3 569 aaPredicted RBP27.06■■□□□ 1.92
CLN6-224ENST00000638076 INTS3Q68E01 1043 aaKnown RBP27.06■■□□□ 1.92
CLN6-224ENST00000638076 HTATSF1O43719 755 aaKnown RBP27.06■■□□□ 1.92
CLN6-224ENST00000638076 RGS12O14924 1447 aa27.06■■□□□ 1.92
CLN6-224ENST00000638076 GNAT3A8MTJ3 354 aa27.05■■□□□ 1.92
CLN6-224ENST00000638076 PTPRCP08575 1304 aa27.04■■□□□ 1.92
CLN6-224ENST00000638076 SLC4A2P04920 1241 aa27.03■■□□□ 1.92
CLN6-224ENST00000638076 ANKRD45Q5TZF3 282 aa27.03■■□□□ 1.92
CLN6-224ENST00000638076 TBC1D32Q96NH3 1257 aa27.03■■□□□ 1.92
CLN6-224ENST00000638076 IP6K1Q92551 441 aa27.02■■□□□ 1.92
CLN6-224ENST00000638076 LTN1O94822 1766 aa27.02■■□□□ 1.92
CLN6-224ENST00000638076 USHBP1Q8N6Y0 703 aa27.02■■□□□ 1.92
CLN6-224ENST00000638076 NFAT5O94916 1531 aa27.01■■□□□ 1.91
CLN6-224ENST00000638076 ORAI2Q96SN7 254 aa27■■□□□ 1.91
CLN6-224ENST00000638076 MAP3K5Q99683 1374 aa26.99■■□□□ 1.91
CLN6-224ENST00000638076 LRRC37A3O60309 1634 aa26.99■■□□□ 1.91
CLN6-224ENST00000638076 KCNH5Q8NCM2 988 aa26.99■■□□□ 1.91
CLN6-224ENST00000638076 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
CLN6-224ENST00000638076 IL17REQ8NFR9 667 aa26.97■■□□□ 1.91
CLN6-224ENST00000638076 MSH6P52701 1360 aa26.97■■□□□ 1.91
CLN6-224ENST00000638076 MFAP1P55081 439 aaKnown RBP26.95■■□□□ 1.91
CLN6-224ENST00000638076 XPCQ01831 940 aaPredicted RBP26.95■■□□□ 1.91
CLN6-224ENST00000638076 BECN1Q14457 450 aa26.95■■□□□ 1.9
CLN6-224ENST00000638076 NBPF6Q5VWK0 638 aa26.95■■□□□ 1.9
CLN6-224ENST00000638076 G2E3Q7L622 706 aa26.95■■□□□ 1.9
CLN6-224ENST00000638076 NBPF4Q96M43 638 aa26.95■■□□□ 1.9
CLN6-224ENST00000638076 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
CLN6-224ENST00000638076 PROSER2Q86WR7 435 aaPredicted RBP26.93■■□□□ 1.9
CLN6-224ENST00000638076 TAF7Q15545 349 aaPredicted RBP26.92■■□□□ 1.9
CLN6-224ENST00000638076 BMP2KLQ5H9B9 411 aa26.92■■□□□ 1.9
CLN6-224ENST00000638076 ANKRD44Q8N8A2 993 aa26.92■■□□□ 1.9
CLN6-224ENST00000638076 STK31Q9BXU1 1019 aa26.92■■□□□ 1.9
CLN6-224ENST00000638076 ATP10DQ9P241 1426 aa26.92■■□□□ 1.9
CLN6-224ENST00000638076 C22orf23Q9BZE7 217 aa26.91■■□□□ 1.9
CLN6-224ENST00000638076 MEIS3Q99687 375 aa26.91■■□□□ 1.9
CLN6-224ENST00000638076 DCTPP1Q9H773 170 aa26.91■■□□□ 1.9
CLN6-224ENST00000638076 RPAP2Q8IXW5 612 aaPredicted RBP26.9■■□□□ 1.9
CLN6-224ENST00000638076 F6X3S4 739 aa26.9■■□□□ 1.9
CLN6-224ENST00000638076 PLEKHG5O94827 1062 aa26.9■■□□□ 1.9
CLN6-224ENST00000638076 GCP02774 474 aa26.9■■□□□ 1.9
CLN6-224ENST00000638076 BABAM1Q9NWV8 329 aa26.9■■□□□ 1.9
CLN6-224ENST00000638076 DEKP35659 375 aaKnown RBP26.89■■□□□ 1.9
CLN6-224ENST00000638076 CEP85Q6P2H3 762 aa26.89■■□□□ 1.9
CLN6-224ENST00000638076 SLC4A10Q6U841 1118 aa26.89■■□□□ 1.9
CLN6-224ENST00000638076 CCDC30Q5VVM6 783 aa26.89■■□□□ 1.89
CLN6-224ENST00000638076 LMOD2Q6P5Q4 547 aa26.89■■□□□ 1.89
CLN6-224ENST00000638076 LRRC59Q96AG4 307 aaKnown RBP26.88■■□□□ 1.89
CLN6-224ENST00000638076 PHRF1Q9P1Y6 1649 aaKnown RBP26.87■■□□□ 1.89
CLN6-224ENST00000638076 CCT4P50991 539 aaKnown RBP26.87■■□□□ 1.89
CLN6-224ENST00000638076 ARHGEF25Q86VW2 580 aa26.87■■□□□ 1.89
CLN6-224ENST00000638076 NECTIN2Q92692 538 aa26.87■■□□□ 1.89
CLN6-224ENST00000638076 NFKBIBQ15653 356 aa26.86■■□□□ 1.89
CLN6-224ENST00000638076 SOS1Q07889 1333 aaPredicted RBP26.85■■□□□ 1.89
CLN6-224ENST00000638076 FLIIQ13045 1269 aa26.85■■□□□ 1.89
CLN6-224ENST00000638076 CEMIPQ8WUJ3 1361 aa26.85■■□□□ 1.89
CLN6-224ENST00000638076 SLIT3O75094 1523 aa26.84■■□□□ 1.89
CLN6-224ENST00000638076 KRT28Q7Z3Y7 464 aa26.84■■□□□ 1.89
CLN6-224ENST00000638076 C19orf44Q9H6X5 657 aa26.84■■□□□ 1.89
CLN6-224ENST00000638076 C1orf167Q5SNV9 1468 aa26.84■■□□□ 1.89
CLN6-224ENST00000638076 TBC1D2Q9BYX2 928 aa26.83■■□□□ 1.89
CLN6-224ENST00000638076 FAM208AQ9UK61 1670 aaKnown RBP26.83■■□□□ 1.89
CLN6-224ENST00000638076 FKBP5Q13451 457 aaPredicted RBP26.83■■□□□ 1.89
CLN6-224ENST00000638076 RGPD2P0DJD1 1756 aa26.83■■□□□ 1.88
CLN6-224ENST00000638076 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
CLN6-224ENST00000638076 TRPM3Q9HCF6 1732 aaPredicted RBP26.8■■□□□ 1.88
CLN6-224ENST00000638076 PLEKHM2Q8IWE5 1019 aa26.8■■□□□ 1.88
CLN6-224ENST00000638076 BCL11AQ9H165 835 aa26.8■■□□□ 1.88
CLN6-224ENST00000638076 ANKRD24Q8TF21 1146 aa26.79■■□□□ 1.88
CLN6-224ENST00000638076 PLEKHO1Q53GL0 409 aaPredicted RBP26.78■■□□□ 1.88
CLN6-224ENST00000638076 ZNF530Q6P9A1 599 aaPredicted RBP26.78■■□□□ 1.88
CLN6-224ENST00000638076 AKAP4Q5JQC9 854 aa26.78■■□□□ 1.88
CLN6-224ENST00000638076 HDGFL1Q5TGJ6 251 aa26.78■■□□□ 1.88
CLN6-224ENST00000638076 KIF1AQ12756 1690 aa26.77■■□□□ 1.88
CLN6-224ENST00000638076 MED1Q15648 1581 aaPredicted RBP26.77■■□□□ 1.88
CLN6-224ENST00000638076 C16orf71Q8IYS4 520 aaPredicted RBP26.77■■□□□ 1.88
CLN6-224ENST00000638076 SLKQ9H2G2 1235 aaPredicted RBP26.77■■□□□ 1.88
CLN6-224ENST00000638076 TBC1D9Q6ZT07 1266 aa26.77■■□□□ 1.88
CLN6-224ENST00000638076 HMMRO75330 724 aa26.76■■□□□ 1.87
CLN6-224ENST00000638076 GSPT1P15170 499 aaKnown RBP26.76■■□□□ 1.87
CLN6-224ENST00000638076 AXIN2Q9Y2T1 843 aa26.76■■□□□ 1.87
CLN6-224ENST00000638076 RBM25P49756 843 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms