RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 NPM2Q86SE8 214 aaKnown RBP23.81■■□□□ 1.4
CLN5-219ENST00000637537 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
CLN5-219ENST00000637537 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
CLN5-219ENST00000637537 RTF1Q92541 710 aaKnown RBP23.81■■□□□ 1.4
CLN5-219ENST00000637537 DDX17Q92841 729 aaKnown RBP23.81■■□□□ 1.4
CLN5-219ENST00000637537 AAMPQ13685 434 aa23.8■■□□□ 1.4
CLN5-219ENST00000637537 DDX19BQ9UMR2 479 aa23.8■■□□□ 1.4
CLN5-219ENST00000637537 NFAT5O94916 1531 aa23.8■■□□□ 1.4
CLN5-219ENST00000637537 C1orf167Q5SNV9 1468 aa23.8■■□□□ 1.4
CLN5-219ENST00000637537 STRCP1A6NGW2 1772 aa23.79■■□□□ 1.4
CLN5-219ENST00000637537 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
CLN5-219ENST00000637537 IP6K1Q92551 441 aa23.79■■□□□ 1.4
CLN5-219ENST00000637537 CRB1P82279 1406 aa23.79■■□□□ 1.4
CLN5-219ENST00000637537 GCP02774 474 aa23.78■■□□□ 1.4
CLN5-219ENST00000637537 BRPF1P55201 1214 aaPredicted RBP23.78■■□□□ 1.4
CLN5-219ENST00000637537 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
CLN5-219ENST00000637537 KCNH5Q8NCM2 988 aa23.77■■□□□ 1.4
CLN5-219ENST00000637537 GAS2L2Q8NHY3 880 aa23.77■■□□□ 1.4
CLN5-219ENST00000637537 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
CLN5-219ENST00000637537 RTN4Q9NQC3 1192 aaKnown RBP23.77■■□□□ 1.4
CLN5-219ENST00000637537 ATF3P18847 181 aa23.76■■□□□ 1.39
CLN5-219ENST00000637537 LRRC59Q96AG4 307 aaKnown RBP23.76■■□□□ 1.39
CLN5-219ENST00000637537 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
CLN5-219ENST00000637537 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
CLN5-219ENST00000637537 ZBTB40Q9NUA8 1239 aa23.75■■□□□ 1.39
CLN5-219ENST00000637537 TSPYL4Q9UJ04 414 aa23.74■■□□□ 1.39
CLN5-219ENST00000637537 GNAT3A8MTJ3 354 aa23.72■■□□□ 1.39
CLN5-219ENST00000637537 C8orf34Q49A92 452 aa23.72■■□□□ 1.39
CLN5-219ENST00000637537 PDZRN3Q9UPQ7 1066 aa23.72■■□□□ 1.39
CLN5-219ENST00000637537 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
CLN5-219ENST00000637537 ARHGEF25Q86VW2 580 aa23.71■■□□□ 1.39
CLN5-219ENST00000637537 ARHGAP45Q92619 1136 aa23.71■■□□□ 1.39
CLN5-219ENST00000637537 RGPD2P0DJD1 1756 aa23.71■■□□□ 1.39
CLN5-219ENST00000637537 MST1RQ04912 1400 aa23.71■■□□□ 1.39
CLN5-219ENST00000637537 IL17REQ8NFR9 667 aa23.7■■□□□ 1.38
CLN5-219ENST00000637537 FAM161AQ3B820 660 aa23.7■■□□□ 1.38
CLN5-219ENST00000637537 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
CLN5-219ENST00000637537 AXIN2Q9Y2T1 843 aa23.7■■□□□ 1.38
CLN5-219ENST00000637537 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
CLN5-219ENST00000637537 MSH6P52701 1360 aa23.69■■□□□ 1.38
CLN5-219ENST00000637537 ZBTB7BO15156 539 aaPredicted RBP23.68■■□□□ 1.38
CLN5-219ENST00000637537 ZC3H6P61129 1189 aaKnown RBP23.68■■□□□ 1.38
CLN5-219ENST00000637537 KIAA0232Q92628 1395 aa23.68■■□□□ 1.38
CLN5-219ENST00000637537 ABCC4O15439 1325 aa23.68■■□□□ 1.38
CLN5-219ENST00000637537 MAP3K5Q99683 1374 aa23.67■■□□□ 1.38
CLN5-219ENST00000637537 USP19O94966 1318 aa23.66■■□□□ 1.38
CLN5-219ENST00000637537 SLIT3O75094 1523 aa23.65■■□□□ 1.38
CLN5-219ENST00000637537 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
CLN5-219ENST00000637537 KIF1AQ12756 1690 aa23.65■■□□□ 1.38
CLN5-219ENST00000637537 ANKRD24Q8TF21 1146 aa23.65■■□□□ 1.38
CLN5-219ENST00000637537 HTATSF1O43719 755 aaKnown RBP23.64■■□□□ 1.38
CLN5-219ENST00000637537 SLC4A2P04920 1241 aa23.64■■□□□ 1.38
CLN5-219ENST00000637537 CABLES1Q8TDN4 633 aa23.64■■□□□ 1.38
CLN5-219ENST00000637537 API5Q9BZZ5 524 aaKnown RBP23.64■■□□□ 1.38
CLN5-219ENST00000637537 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
CLN5-219ENST00000637537 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
CLN5-219ENST00000637537 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
CLN5-219ENST00000637537 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.62■■□□□ 1.37
CLN5-219ENST00000637537 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
CLN5-219ENST00000637537 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
CLN5-219ENST00000637537 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
CLN5-219ENST00000637537 G2E3Q7L622 706 aa23.61■■□□□ 1.37
CLN5-219ENST00000637537 LRRC37A3O60309 1634 aa23.6■■□□□ 1.37
CLN5-219ENST00000637537 UBE2Q2Q8WVN8 375 aa23.6■■□□□ 1.37
CLN5-219ENST00000637537 MED1Q15648 1581 aaPredicted RBP23.59■■□□□ 1.37
CLN5-219ENST00000637537 RGS12O14924 1447 aa23.59■■□□□ 1.37
CLN5-219ENST00000637537 DCCP43146 1447 aa23.59■■□□□ 1.37
CLN5-219ENST00000637537 TAF7Q15545 349 aaPredicted RBP23.59■■□□□ 1.37
CLN5-219ENST00000637537 RGPD5Q99666 1765 aa23.59■■□□□ 1.37
CLN5-219ENST00000637537 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
CLN5-219ENST00000637537 SMC5Q8IY18 1101 aa23.58■■□□□ 1.37
CLN5-219ENST00000637537 ZNF335Q9H4Z2 1342 aaPredicted RBP23.58■■□□□ 1.36
CLN5-219ENST00000637537 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
CLN5-219ENST00000637537 ZNF530Q6P9A1 599 aaPredicted RBP23.57■■□□□ 1.36
CLN5-219ENST00000637537 MPRIPQ6WCQ1 1025 aa23.57■■□□□ 1.36
CLN5-219ENST00000637537 NPHP3Q7Z494 1330 aa23.57■■□□□ 1.36
CLN5-219ENST00000637537 NCOA3Q9Y6Q9 1424 aa23.56■■□□□ 1.36
CLN5-219ENST00000637537 SIRT2Q8IXJ6 389 aa23.56■■□□□ 1.36
CLN5-219ENST00000637537 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
CLN5-219ENST00000637537 F6X3S4 739 aa23.56■■□□□ 1.36
CLN5-219ENST00000637537 GSE1Q14687 1217 aa23.56■■□□□ 1.36
CLN5-219ENST00000637537 SEC24BO95487 1268 aa23.55■■□□□ 1.36
CLN5-219ENST00000637537 DDRGK1Q96HY6 314 aa23.55■■□□□ 1.36
CLN5-219ENST00000637537 ERBB3P21860 1342 aa23.54■■□□□ 1.36
CLN5-219ENST00000637537 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
CLN5-219ENST00000637537 INTS3Q68E01 1043 aaKnown RBP23.54■■□□□ 1.36
CLN5-219ENST00000637537 BRPF3Q9ULD4 1205 aa23.54■■□□□ 1.36
CLN5-219ENST00000637537 CEMIPQ8WUJ3 1361 aa23.54■■□□□ 1.36
CLN5-219ENST00000637537 PLEKHO1Q53GL0 409 aaPredicted RBP23.54■■□□□ 1.36
CLN5-219ENST00000637537 PXDNQ92626 1479 aa23.54■■□□□ 1.36
CLN5-219ENST00000637537 PTPRCP08575 1304 aa23.53■■□□□ 1.36
CLN5-219ENST00000637537 SLC4A10Q6U841 1118 aa23.53■■□□□ 1.36
CLN5-219ENST00000637537 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
CLN5-219ENST00000637537 LNPKQ9C0E8 428 aa23.53■■□□□ 1.36
CLN5-219ENST00000637537 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
CLN5-219ENST00000637537 KCNQ3O43525 872 aa23.52■■□□□ 1.35
CLN5-219ENST00000637537 AKAP4Q5JQC9 854 aa23.52■■□□□ 1.35
CLN5-219ENST00000637537 STK31Q9BXU1 1019 aa23.52■■□□□ 1.35
CLN5-219ENST00000637537 NLRP2Q9NX02 1062 aa23.51■■□□□ 1.35
CLN5-219ENST00000637537 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms