RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
CLN5-216ENST00000636780 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
CLN5-216ENST00000636780 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
CLN5-216ENST00000636780 API5Q9BZZ5 524 aaKnown RBP23.68■■□□□ 1.38
CLN5-216ENST00000636780 HOXC9P31274 260 aa23.67■■□□□ 1.38
CLN5-216ENST00000636780 BECN1Q14457 450 aa23.67■■□□□ 1.38
CLN5-216ENST00000636780 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
CLN5-216ENST00000636780 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
CLN5-216ENST00000636780 VIRMAQ69YN4 1812 aaKnown RBP23.67■■□□□ 1.38
CLN5-216ENST00000636780 NRKQ7Z2Y5 1582 aa23.66■■□□□ 1.38
CLN5-216ENST00000636780 ESCO1Q5FWF5 840 aa23.66■■□□□ 1.38
CLN5-216ENST00000636780 RBM42Q9BTD8 480 aaKnown RBP23.66■■□□□ 1.38
CLN5-216ENST00000636780 FOXD4L1Q9NU39 408 aa23.66■■□□□ 1.38
CLN5-216ENST00000636780 SETD1BQ9UPS6 1966 aaKnown RBP23.66■■□□□ 1.38
CLN5-216ENST00000636780 PIK3R4Q99570 1358 aa23.66■■□□□ 1.38
CLN5-216ENST00000636780 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
CLN5-216ENST00000636780 CRB1P82279 1406 aa23.65■■□□□ 1.38
CLN5-216ENST00000636780 FLT4P35916 1363 aa23.65■■□□□ 1.38
CLN5-216ENST00000636780 MSH6P52701 1360 aa23.65■■□□□ 1.38
CLN5-216ENST00000636780 IL17REQ8NFR9 667 aa23.64■■□□□ 1.37
CLN5-216ENST00000636780 TTC21AQ8NDW8 1320 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 ANTXR1Q9H6X2 564 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 ARHGAP23Q9P227 1491 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 SBNO1A3KN83 1393 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 IL27Q8NEV9 243 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 LRRC59Q96AG4 307 aaKnown RBP23.63■■□□□ 1.37
CLN5-216ENST00000636780 ARXQ96QS3 562 aa23.63■■□□□ 1.37
CLN5-216ENST00000636780 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
CLN5-216ENST00000636780 TOPAZ1Q8N9V7 1692 aa23.62■■□□□ 1.37
CLN5-216ENST00000636780 GSPT1P15170 499 aaKnown RBP23.62■■□□□ 1.37
CLN5-216ENST00000636780 RGS12O14924 1447 aa23.62■■□□□ 1.37
CLN5-216ENST00000636780 TSHZ3Q63HK5 1081 aa23.62■■□□□ 1.37
CLN5-216ENST00000636780 TBC1D9Q6ZT07 1266 aa23.62■■□□□ 1.37
CLN5-216ENST00000636780 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
CLN5-216ENST00000636780 GSE1Q14687 1217 aa23.61■■□□□ 1.37
CLN5-216ENST00000636780 GCC1Q96CN9 775 aa23.61■■□□□ 1.37
CLN5-216ENST00000636780 PHF8Q9UPP1 1060 aa23.61■■□□□ 1.37
CLN5-216ENST00000636780 SLIT1O75093 1534 aa23.61■■□□□ 1.37
CLN5-216ENST00000636780 CD2BP2O95400 341 aaKnown RBP23.6■■□□□ 1.37
CLN5-216ENST00000636780 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
CLN5-216ENST00000636780 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
CLN5-216ENST00000636780 CEP85Q6P2H3 762 aa23.6■■□□□ 1.37
CLN5-216ENST00000636780 FER1L4A9Z1Z3 1794 aa23.59■■□□□ 1.37
CLN5-216ENST00000636780 PLEKHM2Q8IWE5 1019 aa23.59■■□□□ 1.37
CLN5-216ENST00000636780 LGR6Q9HBX8 967 aa23.58■■□□□ 1.37
CLN5-216ENST00000636780 PSME1Q06323 249 aa23.58■■□□□ 1.37
CLN5-216ENST00000636780 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
CLN5-216ENST00000636780 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
CLN5-216ENST00000636780 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
CLN5-216ENST00000636780 ANXA1P04083 346 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 BMP2KLQ5H9B9 411 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 DCTPP1Q9H773 170 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 ARHGEF10O15013 1369 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 GNAT3A8MTJ3 354 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 KCNQ3O43525 872 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 EIF2S2P20042 333 aaKnown RBP23.56■■□□□ 1.36
CLN5-216ENST00000636780 FKBP5Q13451 457 aaPredicted RBP23.56■■□□□ 1.36
CLN5-216ENST00000636780 BRPF3Q9ULD4 1205 aa23.56■■□□□ 1.36
CLN5-216ENST00000636780 EXOC6BQ9Y2D4 811 aa23.55■■□□□ 1.36
CLN5-216ENST00000636780 ANKRD44Q8N8A2 993 aa23.55■■□□□ 1.36
CLN5-216ENST00000636780 PHAXQ9H814 394 aaKnown RBP23.55■■□□□ 1.36
CLN5-216ENST00000636780 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
CLN5-216ENST00000636780 KIF2CQ99661 725 aa23.54■■□□□ 1.36
CLN5-216ENST00000636780 GAS2L2Q8NHY3 880 aa23.54■■□□□ 1.36
CLN5-216ENST00000636780 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
CLN5-216ENST00000636780 KDRP35968 1356 aa23.53■■□□□ 1.36
CLN5-216ENST00000636780 ATP10DQ9P241 1426 aa23.52■■□□□ 1.36
CLN5-216ENST00000636780 GZF1Q9H116 711 aaPredicted RBP23.51■■□□□ 1.35
CLN5-216ENST00000636780 RGPD1P0DJD0 1748 aa23.51■■□□□ 1.35
CLN5-216ENST00000636780 NALCNQ8IZF0 1738 aa23.51■■□□□ 1.35
CLN5-216ENST00000636780 KIAA0232Q92628 1395 aa23.51■■□□□ 1.35
CLN5-216ENST00000636780 FLIIQ13045 1269 aa23.51■■□□□ 1.35
CLN5-216ENST00000636780 MPRIPQ6WCQ1 1025 aa23.5■■□□□ 1.35
CLN5-216ENST00000636780 CHMP4BQ9H444 224 aaKnown RBP23.5■■□□□ 1.35
CLN5-216ENST00000636780 PNMA6EA0A0J9YXQ4 647 aa23.49■■□□□ 1.35
CLN5-216ENST00000636780 STK31Q9BXU1 1019 aa23.49■■□□□ 1.35
CLN5-216ENST00000636780 HSCBQ8IWL3 235 aa23.47■■□□□ 1.35
CLN5-216ENST00000636780 PTPRCP08575 1304 aa23.47■■□□□ 1.35
CLN5-216ENST00000636780 SDSP20132 328 aa23.46■■□□□ 1.35
CLN5-216ENST00000636780 RBM25P49756 843 aaKnown RBP23.46■■□□□ 1.35
CLN5-216ENST00000636780 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
CLN5-216ENST00000636780 TTC22Q5TAA0 569 aa23.46■■□□□ 1.35
CLN5-216ENST00000636780 AXIN2Q9Y2T1 843 aa23.45■■□□□ 1.34
CLN5-216ENST00000636780 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
CLN5-216ENST00000636780 RPAP2Q8IXW5 612 aaPredicted RBP23.45■■□□□ 1.34
CLN5-216ENST00000636780 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
CLN5-216ENST00000636780 ZC3H6P61129 1189 aaKnown RBP23.43■■□□□ 1.34
CLN5-216ENST00000636780 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
CLN5-216ENST00000636780 XRN1Q8IZH2 1706 aaKnown RBP23.43■■□□□ 1.34
CLN5-216ENST00000636780 MAP3K5Q99683 1374 aa23.43■■□□□ 1.34
CLN5-216ENST00000636780 CDC45O75419 566 aa23.43■■□□□ 1.34
CLN5-216ENST00000636780 IP6K1Q92551 441 aa23.43■■□□□ 1.34
CLN5-216ENST00000636780 ANO8Q9HCE9 1232 aaPredicted RBP23.43■■□□□ 1.34
CLN5-216ENST00000636780 NWD1Q149M9 1564 aa23.42■■□□□ 1.34
CLN5-216ENST00000636780 CCDC30Q5VVM6 783 aa23.42■■□□□ 1.34
CLN5-216ENST00000636780 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
CLN5-216ENST00000636780 HSP90AB1P08238 724 aaKnown RBP23.42■■□□□ 1.34
CLN5-216ENST00000636780 GCP02774 474 aa23.41■■□□□ 1.34
CLN5-216ENST00000636780 IL1RAPL2Q9NP60 686 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms