RNA–Protein interactions for RNA: ENST00000636647.1

CHRNA7-218, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-218ENST00000636647 SMC4Q9NTJ3 1288 aa6.36□□□□□ -1.39
CHRNA7-218ENST00000636647 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
CHRNA7-218ENST00000636647 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.36□□□□□ -1.39
CHRNA7-218ENST00000636647 DIP2AQ14689 1571 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 NWD1Q149M9 1564 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 NSD2O96028 1365 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 PNPLA6Q8IY17 1366 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 MINK1Q8N4C8 1332 aaPredicted RBP6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 VGFO15240 615 aaPredicted RBP6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 MCM4P33991 863 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 MFAP1P55081 439 aaKnown RBP6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 RIPK4P57078 832 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 SGIP1Q9BQI5 828 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 C22orf23Q9BZE7 217 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 ZMYND15Q9H091 742 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 SLC24A3Q9HC58 644 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 ZBTB40Q9NUA8 1239 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 SLC52A1Q9NWF4 448 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 ANKRD26Q9UPS8 1709 aa6.35□□□□□ -1.39
CHRNA7-218ENST00000636647 ARHGAP31Q2M1Z3 1444 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 FSD2A1L4K1 749 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 DDIT3P35638 169 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 HDGFP51858 240 aaKnown RBP6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 SRPK2P78362 688 aaKnown RBP6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 ATF7IPQ6VMQ6 1270 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 ITPRIPQ8IWB1 547 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 MRPL50Q8N5N7 158 aaKnown RBP6.34□□□□□ -1.39
CHRNA7-218ENST00000636647 ZFYVE9O95405 1425 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 IL16Q14005 1332 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 VAMP4O75379 141 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 CT47B1P0C2W7 299 aaPredicted RBP6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 BAG6P46379 1132 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 NUCB1Q02818 461 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 FTSJ3Q8IY81 847 aaKnown RBP6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 PHACTR3Q96KR7 559 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 THUMPD2Q9BTF0 503 aaKnown RBP6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 CDK19Q9BWU1 502 aa6.33□□□□□ -1.4
CHRNA7-218ENST00000636647 TMEM131LA2VDJ0 1609 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 SPDYE2BA6NHP3 402 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 DIAPH1O60610 1272 aaKnown RBP6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 SPDYE6P0CI01 402 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 SPDYE2Q495Y8 402 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 SIRT2Q8IXJ6 389 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 TSPYL6Q8N831 410 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 KIF2CQ99661 725 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 LNPKQ9C0E8 428 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 CABP1Q9NZU7 370 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 CHMP5Q9NZZ3 219 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 PPIP5K1Q6PFW1 1433 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 YTHDC2Q9H6S0 1430 aaKnown RBP6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 NCOA3Q9Y6Q9 1424 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
CHRNA7-218ENST00000636647 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 TRAK2O60296 914 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 CD2BP2O95400 341 aaKnown RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 XPCQ01831 940 aaPredicted RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 EN1Q05925 392 aaPredicted RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 UBE2Q2Q8WVN8 375 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 GJD4Q96KN9 370 aaPredicted RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 UPF2Q9HAU5 1272 aaKnown RBP6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 POLKQ9UBT6 870 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 ATRNO75882 1429 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 RIMS2Q9UQ26 1411 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 CDC42BPGQ6DT37 1551 aa6.31□□□□□ -1.4
CHRNA7-218ENST00000636647 NHSL1Q5SYE7 1610 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 HMOX1P09601 288 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 ZNF853P0CG23 659 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 PRKAR2BP31323 418 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 NUBP1P53384 320 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 ALDH1L2Q3SY69 923 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 FAM182BQ5T319 152 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 CHD1LQ86WJ1 897 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 SEPT12Q8IYM1 358 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 SNX21Q969T3 373 aa6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 RBM42Q9BTD8 480 aaKnown RBP6.3□□□□□ -1.4
CHRNA7-218ENST00000636647 CHD2O14647 1828 aaKnown RBP6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 ELL2O00472 640 aaPredicted RBP6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 IPO8O15397 1037 aaKnown RBP6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 FCHSD2O94868 740 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 IL13P35225 146 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 KNDC1Q76NI1 1749 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 GAS2L3Q86XJ1 694 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 C8orf58Q8NAV2 365 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 TERF2IPQ9NYB0 399 aa6.29□□□□□ -1.4
CHRNA7-218ENST00000636647 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms