RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 NUCB1Q02818 461 aa18.88■□□□□ 0.61
CLN5-209ENST00000636405 API5Q9BZZ5 524 aaKnown RBP18.88■□□□□ 0.61
CLN5-209ENST00000636405 DEKP35659 375 aaKnown RBP18.88■□□□□ 0.61
CLN5-209ENST00000636405 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
CLN5-209ENST00000636405 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
CLN5-209ENST00000636405 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
CLN5-209ENST00000636405 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
CLN5-209ENST00000636405 CHD1LQ86WJ1 897 aa18.87■□□□□ 0.61
CLN5-209ENST00000636405 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
CLN5-209ENST00000636405 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
CLN5-209ENST00000636405 PSME1Q06323 249 aa18.86■□□□□ 0.61
CLN5-209ENST00000636405 G2E3Q7L622 706 aa18.86■□□□□ 0.61
CLN5-209ENST00000636405 KDRP35968 1356 aa18.85■□□□□ 0.61
CLN5-209ENST00000636405 F6X3S4 739 aa18.84■□□□□ 0.61
CLN5-209ENST00000636405 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
CLN5-209ENST00000636405 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
CLN5-209ENST00000636405 TBC1D32Q96NH3 1257 aa18.83■□□□□ 0.6
CLN5-209ENST00000636405 FMN2Q9NZ56 1722 aa18.83■□□□□ 0.6
CLN5-209ENST00000636405 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
CLN5-209ENST00000636405 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
CLN5-209ENST00000636405 SLC4A10Q6U841 1118 aa18.82■□□□□ 0.6
CLN5-209ENST00000636405 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
CLN5-209ENST00000636405 RGS12O14924 1447 aa18.81■□□□□ 0.6
CLN5-209ENST00000636405 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 APBB1O00213 710 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 MEIS3Q99687 375 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
CLN5-209ENST00000636405 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
CLN5-209ENST00000636405 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
CLN5-209ENST00000636405 NFKBIBQ15653 356 aa18.79■□□□□ 0.6
CLN5-209ENST00000636405 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
CLN5-209ENST00000636405 SLKQ9H2G2 1235 aaPredicted RBP18.79■□□□□ 0.6
CLN5-209ENST00000636405 SETD1BQ9UPS6 1966 aaKnown RBP18.79■□□□□ 0.6
CLN5-209ENST00000636405 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
CLN5-209ENST00000636405 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
CLN5-209ENST00000636405 MSH6P52701 1360 aa18.79■□□□□ 0.6
CLN5-209ENST00000636405 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
CLN5-209ENST00000636405 MARF1Q9Y4F3 1742 aaKnown RBP18.78■□□□□ 0.6
CLN5-209ENST00000636405 C16orf71Q8IYS4 520 aaPredicted RBP18.78■□□□□ 0.6
CLN5-209ENST00000636405 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
CLN5-209ENST00000636405 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
CLN5-209ENST00000636405 IP6K1Q92551 441 aa18.76■□□□□ 0.59
CLN5-209ENST00000636405 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
CLN5-209ENST00000636405 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CLN5-209ENST00000636405 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
CLN5-209ENST00000636405 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
CLN5-209ENST00000636405 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
CLN5-209ENST00000636405 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
CLN5-209ENST00000636405 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
CLN5-209ENST00000636405 FRAT2O75474 233 aaPredicted RBP18.74■□□□□ 0.59
CLN5-209ENST00000636405 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
CLN5-209ENST00000636405 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
CLN5-209ENST00000636405 PTPRCP08575 1304 aa18.74■□□□□ 0.59
CLN5-209ENST00000636405 BECN1Q14457 450 aa18.73■□□□□ 0.59
CLN5-209ENST00000636405 DDX17Q92841 729 aaKnown RBP18.73■□□□□ 0.59
CLN5-209ENST00000636405 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
CLN5-209ENST00000636405 GCP02774 474 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 ANKRD44Q8N8A2 993 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 TAF7Q15545 349 aaPredicted RBP18.72■□□□□ 0.59
CLN5-209ENST00000636405 STK31Q9BXU1 1019 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
CLN5-209ENST00000636405 FKBP5Q13451 457 aaPredicted RBP18.71■□□□□ 0.59
CLN5-209ENST00000636405 BMP2KLQ5H9B9 411 aa18.71■□□□□ 0.59
CLN5-209ENST00000636405 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
CLN5-209ENST00000636405 KCNQ3O43525 872 aa18.7■□□□□ 0.58
CLN5-209ENST00000636405 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
CLN5-209ENST00000636405 FLIIQ13045 1269 aa18.7■□□□□ 0.58
CLN5-209ENST00000636405 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
CLN5-209ENST00000636405 GSPT1P15170 499 aaKnown RBP18.69■□□□□ 0.58
CLN5-209ENST00000636405 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
CLN5-209ENST00000636405 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
CLN5-209ENST00000636405 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
CLN5-209ENST00000636405 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
CLN5-209ENST00000636405 ZNF142P52746 1687 aaPredicted RBP18.68■□□□□ 0.58
CLN5-209ENST00000636405 CCDC30Q5VVM6 783 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 TBC1D9Q6ZT07 1266 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 PHAXQ9H814 394 aaKnown RBP18.68■□□□□ 0.58
CLN5-209ENST00000636405 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 RPAP2Q8IXW5 612 aaPredicted RBP18.68■□□□□ 0.58
CLN5-209ENST00000636405 NFAT5O94916 1531 aa18.68■□□□□ 0.58
CLN5-209ENST00000636405 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
CLN5-209ENST00000636405 LTN1O94822 1766 aa18.67■□□□□ 0.58
CLN5-209ENST00000636405 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
CLN5-209ENST00000636405 ARHGEF25Q86VW2 580 aa18.66■□□□□ 0.58
CLN5-209ENST00000636405 ANXA1P04083 346 aa18.66■□□□□ 0.58
CLN5-209ENST00000636405 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
CLN5-209ENST00000636405 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
CLN5-209ENST00000636405 CCT4P50991 539 aaKnown RBP18.64■□□□□ 0.57
CLN5-209ENST00000636405 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
CLN5-209ENST00000636405 ANTXR1Q9H6X2 564 aa18.63■□□□□ 0.57
CLN5-209ENST00000636405 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
CLN5-209ENST00000636405 PNMA6EA0A0J9YXQ4 647 aa18.62■□□□□ 0.57
CLN5-209ENST00000636405 TSHZ3Q63HK5 1081 aa18.62■□□□□ 0.57
CLN5-209ENST00000636405 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms