RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 CAMSAP1Q5T5Y3 1602 aa17.71■□□□□ 0.43
PTBP1-221ENST00000635647 CLCN1P35523 988 aa17.71■□□□□ 0.43
PTBP1-221ENST00000635647 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
PTBP1-221ENST00000635647 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
PTBP1-221ENST00000635647 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
PTBP1-221ENST00000635647 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
PTBP1-221ENST00000635647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.7■□□□□ 0.42
PTBP1-221ENST00000635647 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
PTBP1-221ENST00000635647 PPLO60437 1756 aa17.7■□□□□ 0.42
PTBP1-221ENST00000635647 RNF214Q8ND24 703 aa17.7■□□□□ 0.42
PTBP1-221ENST00000635647 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
PTBP1-221ENST00000635647 NEXMIFQ5QGS0 1516 aa17.7■□□□□ 0.42
PTBP1-221ENST00000635647 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-221ENST00000635647 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-221ENST00000635647 SNX21Q969T3 373 aa17.69■□□□□ 0.42
PTBP1-221ENST00000635647 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
PTBP1-221ENST00000635647 ACEP12821 1306 aa17.69■□□□□ 0.42
PTBP1-221ENST00000635647 SDSP20132 328 aa17.69■□□□□ 0.42
PTBP1-221ENST00000635647 AIMP1Q12904 312 aaKnown RBP17.69■□□□□ 0.42
PTBP1-221ENST00000635647 ABTB2Q8N961 1025 aa17.69■□□□□ 0.42
PTBP1-221ENST00000635647 ANXA1P04083 346 aa17.68■□□□□ 0.42
PTBP1-221ENST00000635647 NEK4P51957 841 aa17.68■□□□□ 0.42
PTBP1-221ENST00000635647 RABEP1Q15276 862 aa17.68■□□□□ 0.42
PTBP1-221ENST00000635647 TTC22Q5TAA0 569 aa17.68■□□□□ 0.42
PTBP1-221ENST00000635647 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
PTBP1-221ENST00000635647 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
PTBP1-221ENST00000635647 REC8O95072 547 aa17.67■□□□□ 0.42
PTBP1-221ENST00000635647 G2E3Q7L622 706 aa17.67■□□□□ 0.42
PTBP1-221ENST00000635647 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
PTBP1-221ENST00000635647 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
PTBP1-221ENST00000635647 METP08581 1390 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 MYO3AQ8NEV4 1616 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-221ENST00000635647 PTPRMP28827 1452 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 UPF3BQ9BZI7 483 aaKnown RBP17.66■□□□□ 0.42
PTBP1-221ENST00000635647 ABCC4O15439 1325 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 ZHX1Q9UKY1 873 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-221ENST00000635647 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
PTBP1-221ENST00000635647 NASPP49321 788 aaPredicted RBP17.65■□□□□ 0.42
PTBP1-221ENST00000635647 FAM135BQ49AJ0 1406 aa17.65■□□□□ 0.42
PTBP1-221ENST00000635647 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
PTBP1-221ENST00000635647 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
PTBP1-221ENST00000635647 ZC3H13Q5T200 1668 aaKnown RBP17.65■□□□□ 0.42
PTBP1-221ENST00000635647 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
PTBP1-221ENST00000635647 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
PTBP1-221ENST00000635647 CHAMP1Q96JM3 812 aa17.64■□□□□ 0.41
PTBP1-221ENST00000635647 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.41
PTBP1-221ENST00000635647 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
PTBP1-221ENST00000635647 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
PTBP1-221ENST00000635647 GAS2L3Q86XJ1 694 aa17.64■□□□□ 0.41
PTBP1-221ENST00000635647 ZGPATQ8N5A5 531 aaKnown RBP17.64■□□□□ 0.41
PTBP1-221ENST00000635647 MCCP23508 829 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 NEO1Q92859 1461 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 ZNF853P0CG23 659 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 MSH6P52701 1360 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 NUCB2P80303 420 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 TEFQ10587 303 aa17.63■□□□□ 0.41
PTBP1-221ENST00000635647 PTMSP20962 102 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 PKP1Q13835 747 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 KIF2CQ99661 725 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
PTBP1-221ENST00000635647 ERC2O15083 957 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 GNAI2P04899 355 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
PTBP1-221ENST00000635647 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 CD163L1Q9NR16 1453 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 PIK3C2BO00750 1634 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 FGD1P98174 961 aa17.62■□□□□ 0.41
PTBP1-221ENST00000635647 EDC4Q6P2E9 1401 aaKnown RBP17.61■□□□□ 0.41
PTBP1-221ENST00000635647 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
PTBP1-221ENST00000635647 USP26Q9BXU7 913 aa17.6■□□□□ 0.41
PTBP1-221ENST00000635647 FSD2A1L4K1 749 aa17.6■□□□□ 0.41
PTBP1-221ENST00000635647 PSME1Q06323 249 aa17.6■□□□□ 0.41
PTBP1-221ENST00000635647 PRR36Q9H6K5 1346 aa17.6■□□□□ 0.41
PTBP1-221ENST00000635647 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
PTBP1-221ENST00000635647 ALKQ9UM73 1620 aa17.59■□□□□ 0.41
PTBP1-221ENST00000635647 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
PTBP1-221ENST00000635647 CHL1O00533 1208 aa17.59■□□□□ 0.41
PTBP1-221ENST00000635647 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
PTBP1-221ENST00000635647 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.41
PTBP1-221ENST00000635647 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.41
PTBP1-221ENST00000635647 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
PTBP1-221ENST00000635647 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
PTBP1-221ENST00000635647 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 DIP2CQ9Y2E4 1556 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 TPM2P07951 284 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
PTBP1-221ENST00000635647 ESCO1Q5FWF5 840 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.4
PTBP1-221ENST00000635647 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
PTBP1-221ENST00000635647 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
PTBP1-221ENST00000635647 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
PTBP1-221ENST00000635647 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
PTBP1-221ENST00000635647 FOSBP53539 338 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms