RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
PTPN11-205ENST00000635625 BECN1Q14457 450 aa15.66■□□□□ 0.1
PTPN11-205ENST00000635625 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
PTPN11-205ENST00000635625 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
PTPN11-205ENST00000635625 API5Q9BZZ5 524 aaKnown RBP15.66■□□□□ 0.1
PTPN11-205ENST00000635625 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
PTPN11-205ENST00000635625 KIAA0232Q92628 1395 aa15.65■□□□□ 0.1
PTPN11-205ENST00000635625 EIF4A2Q14240 407 aaKnown RBP15.65■□□□□ 0.1
PTPN11-205ENST00000635625 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
PTPN11-205ENST00000635625 ABCC4O15439 1325 aa15.65■□□□□ 0.1
PTPN11-205ENST00000635625 PIK3C2AO00443 1686 aa15.65■□□□□ 0.1
PTPN11-205ENST00000635625 FLT4P35916 1363 aa15.65■□□□□ 0.1
PTPN11-205ENST00000635625 FBLN1P23142 703 aa15.64■□□□□ 0.09
PTPN11-205ENST00000635625 TWISTNBQ3B726 338 aaPredicted RBP15.64■□□□□ 0.09
PTPN11-205ENST00000635625 USP19O94966 1318 aa15.64■□□□□ 0.09
PTPN11-205ENST00000635625 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
PTPN11-205ENST00000635625 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
PTPN11-205ENST00000635625 VASPP50552 380 aaPredicted RBP15.62■□□□□ 0.09
PTPN11-205ENST00000635625 GCC1Q96CN9 775 aa15.62■□□□□ 0.09
PTPN11-205ENST00000635625 KDRP35968 1356 aa15.62■□□□□ 0.09
PTPN11-205ENST00000635625 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
PTPN11-205ENST00000635625 CHD2O14647 1828 aaKnown RBP15.6■□□□□ 0.09
PTPN11-205ENST00000635625 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
PTPN11-205ENST00000635625 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
PTPN11-205ENST00000635625 NUCB1Q02818 461 aa15.6■□□□□ 0.09
PTPN11-205ENST00000635625 SULT6B1Q6IMI4 303 aa15.6■□□□□ 0.09
PTPN11-205ENST00000635625 TBC1D32Q96NH3 1257 aa15.6■□□□□ 0.09
PTPN11-205ENST00000635625 LRRC37A3O60309 1634 aa15.6■□□□□ 0.09
PTPN11-205ENST00000635625 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.092e-9■■■■□ 19.4
PTPN11-205ENST00000635625 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
PTPN11-205ENST00000635625 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
PTPN11-205ENST00000635625 CHL1O00533 1208 aa15.58■□□□□ 0.08
PTPN11-205ENST00000635625 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.08
PTPN11-205ENST00000635625 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
PTPN11-205ENST00000635625 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
PTPN11-205ENST00000635625 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
PTPN11-205ENST00000635625 ILDR1Q86SU0 546 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-205ENST00000635625 PTPRCP08575 1304 aa15.57■□□□□ 0.08
PTPN11-205ENST00000635625 CRB1P82279 1406 aa15.57■□□□□ 0.08
PTPN11-205ENST00000635625 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
PTPN11-205ENST00000635625 MAP3K19Q56UN5 1328 aa15.57■□□□□ 0.08
PTPN11-205ENST00000635625 IGSF1Q8N6C5 1336 aa15.57■□□□□ 0.08
PTPN11-205ENST00000635625 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
PTPN11-205ENST00000635625 C8orf58Q8NAV2 365 aa15.56■□□□□ 0.08
PTPN11-205ENST00000635625 GAS2L2Q8NHY3 880 aa15.56■□□□□ 0.08
PTPN11-205ENST00000635625 CHD1LQ86WJ1 897 aa15.55■□□□□ 0.08
PTPN11-205ENST00000635625 AEBP1Q8IUX7 1158 aa15.55■□□□□ 0.08
PTPN11-205ENST00000635625 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
PTPN11-205ENST00000635625 HSP90AB2PQ58FF8 381 aa15.54■□□□□ 0.08
PTPN11-205ENST00000635625 INTS3Q68E01 1043 aaKnown RBP15.54■□□□□ 0.08
PTPN11-205ENST00000635625 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
PTPN11-205ENST00000635625 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
PTPN11-205ENST00000635625 SEC24BO95487 1268 aa15.54■□□□□ 0.08
PTPN11-205ENST00000635625 BMP2KLQ5H9B9 411 aa15.54■□□□□ 0.08
PTPN11-205ENST00000635625 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
PTPN11-205ENST00000635625 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
PTPN11-205ENST00000635625 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
PTPN11-205ENST00000635625 FAM83GA6ND36 823 aa15.52■□□□□ 0.08
PTPN11-205ENST00000635625 AMPHP49418 695 aa15.52■□□□□ 0.08
PTPN11-205ENST00000635625 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
PTPN11-205ENST00000635625 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
PTPN11-205ENST00000635625 NFKBIBQ15653 356 aa15.52■□□□□ 0.07
PTPN11-205ENST00000635625 CERKQ8TCT0 537 aa15.52■□□□□ 0.07
PTPN11-205ENST00000635625 RGS12O14924 1447 aa15.51■□□□□ 0.07
PTPN11-205ENST00000635625 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-205ENST00000635625 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
PTPN11-205ENST00000635625 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
PTPN11-205ENST00000635625 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
PTPN11-205ENST00000635625 FAM208AQ9UK61 1670 aaKnown RBP15.5■□□□□ 0.07
PTPN11-205ENST00000635625 LTN1O94822 1766 aa15.5■□□□□ 0.07
PTPN11-205ENST00000635625 ADGRL3Q9HAR2 1447 aa15.5■□□□□ 0.07
PTPN11-205ENST00000635625 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
PTPN11-205ENST00000635625 KCNA6P17658 529 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 RPAP2Q8IXW5 612 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-205ENST00000635625 C22orf23Q9BZE7 217 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 LTBP4Q8N2S1 1624 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
PTPN11-205ENST00000635625 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-205ENST00000635625 NLRP6P59044 892 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 MCM10Q7L590 875 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 LNPKQ9C0E8 428 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 HOXC9P31274 260 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 RBM25P49756 843 aaKnown RBP15.47■□□□□ 0.07
PTPN11-205ENST00000635625 MTHFSDQ2M296 383 aaKnown RBP15.47■□□□□ 0.07
PTPN11-205ENST00000635625 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 EYA1Q99502 592 aa15.47■□□□□ 0.07
PTPN11-205ENST00000635625 NFAT5O94916 1531 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 ANKRD45Q5TZF3 282 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
PTPN11-205ENST00000635625 NPHP4O75161 1426 aaPredicted RBP15.46■□□□□ 0.06
PTPN11-205ENST00000635625 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
PTPN11-205ENST00000635625 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
PTPN11-205ENST00000635625 FBXO41Q8TF61 875 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms