RNA–Protein interactions for RNA: ENST00000635619.1

LINC01346-203, Transcript of long intergenic non-protein coding RNA 1346, humanhuman

TSL 4

Gene LINC01346, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01346-203ENST00000635619 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
LINC01346-203ENST00000635619 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
LINC01346-203ENST00000635619 RGPD2P0DJD1 1756 aa17.63■□□□□ 0.41
LINC01346-203ENST00000635619 MEGF6O75095 1541 aa17.62■□□□□ 0.41
LINC01346-203ENST00000635619 SULT6B1Q6IMI4 303 aa17.62■□□□□ 0.41
LINC01346-203ENST00000635619 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
LINC01346-203ENST00000635619 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
LINC01346-203ENST00000635619 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
LINC01346-203ENST00000635619 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
LINC01346-203ENST00000635619 KDRP35968 1356 aa17.6■□□□□ 0.41
LINC01346-203ENST00000635619 MYBBP1AQ9BQG0 1328 aaKnown RBP17.59■□□□□ 0.41
LINC01346-203ENST00000635619 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
LINC01346-203ENST00000635619 TRIM37O94972 964 aa17.59■□□□□ 0.41
LINC01346-203ENST00000635619 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
LINC01346-203ENST00000635619 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
LINC01346-203ENST00000635619 BAG6P46379 1132 aa17.58■□□□□ 0.4
LINC01346-203ENST00000635619 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
LINC01346-203ENST00000635619 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
LINC01346-203ENST00000635619 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
LINC01346-203ENST00000635619 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
LINC01346-203ENST00000635619 CYP27B1O15528 508 aa17.55■□□□□ 0.4
LINC01346-203ENST00000635619 APBA3O96018 575 aa17.55■□□□□ 0.4
LINC01346-203ENST00000635619 HMOX1P09601 288 aa17.55■□□□□ 0.4
LINC01346-203ENST00000635619 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
LINC01346-203ENST00000635619 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
LINC01346-203ENST00000635619 PLSCR1O15162 318 aa17.53■□□□□ 0.4
LINC01346-203ENST00000635619 ANP32CO43423 234 aa17.53■□□□□ 0.4
LINC01346-203ENST00000635619 FCHSD2O94868 740 aa17.53■□□□□ 0.4
LINC01346-203ENST00000635619 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
LINC01346-203ENST00000635619 PHKG2P15735 406 aa17.53■□□□□ 0.4
LINC01346-203ENST00000635619 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
LINC01346-203ENST00000635619 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
LINC01346-203ENST00000635619 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
LINC01346-203ENST00000635619 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
LINC01346-203ENST00000635619 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
LINC01346-203ENST00000635619 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
LINC01346-203ENST00000635619 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
LINC01346-203ENST00000635619 KCNQ2O43526 872 aa17.5■□□□□ 0.39
LINC01346-203ENST00000635619 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
LINC01346-203ENST00000635619 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
LINC01346-203ENST00000635619 DCAF5Q96JK2 942 aa17.5■□□□□ 0.39
LINC01346-203ENST00000635619 NEFMP07197 916 aa17.49■□□□□ 0.39
LINC01346-203ENST00000635619 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
LINC01346-203ENST00000635619 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
LINC01346-203ENST00000635619 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
LINC01346-203ENST00000635619 EP400Q96L91 3159 aa17.49■□□□□ 0.39
LINC01346-203ENST00000635619 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
LINC01346-203ENST00000635619 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
LINC01346-203ENST00000635619 SBF2Q86WG5 1849 aa17.48■□□□□ 0.39
LINC01346-203ENST00000635619 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
LINC01346-203ENST00000635619 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
LINC01346-203ENST00000635619 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
LINC01346-203ENST00000635619 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
LINC01346-203ENST00000635619 EZH2Q15910 746 aaKnown RBP17.46■□□□□ 0.39
LINC01346-203ENST00000635619 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
LINC01346-203ENST00000635619 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
LINC01346-203ENST00000635619 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
LINC01346-203ENST00000635619 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
LINC01346-203ENST00000635619 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
LINC01346-203ENST00000635619 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC01346-203ENST00000635619 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
LINC01346-203ENST00000635619 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
LINC01346-203ENST00000635619 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
LINC01346-203ENST00000635619 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
LINC01346-203ENST00000635619 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
LINC01346-203ENST00000635619 CABP4P57796 275 aa17.41■□□□□ 0.38
LINC01346-203ENST00000635619 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
LINC01346-203ENST00000635619 PIGBQ92521 554 aa17.41■□□□□ 0.38
LINC01346-203ENST00000635619 SLC27A3Q5K4L6 730 aa17.4■□□□□ 0.38
LINC01346-203ENST00000635619 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
LINC01346-203ENST00000635619 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
LINC01346-203ENST00000635619 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
LINC01346-203ENST00000635619 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
LINC01346-203ENST00000635619 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
LINC01346-203ENST00000635619 PROM2Q8N271 834 aa17.39■□□□□ 0.37
LINC01346-203ENST00000635619 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
LINC01346-203ENST00000635619 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
LINC01346-203ENST00000635619 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
LINC01346-203ENST00000635619 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
LINC01346-203ENST00000635619 NFATC2IPQ8NCF5 419 aa17.38■□□□□ 0.37
LINC01346-203ENST00000635619 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
LINC01346-203ENST00000635619 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
LINC01346-203ENST00000635619 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
LINC01346-203ENST00000635619 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
LINC01346-203ENST00000635619 BTAF1O14981 1849 aa17.37■□□□□ 0.37
LINC01346-203ENST00000635619 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
LINC01346-203ENST00000635619 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
LINC01346-203ENST00000635619 TEFQ10587 303 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
LINC01346-203ENST00000635619 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
LINC01346-203ENST00000635619 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
LINC01346-203ENST00000635619 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
LINC01346-203ENST00000635619 ITGB4P16144 1822 aa17.33■□□□□ 0.37
LINC01346-203ENST00000635619 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
LINC01346-203ENST00000635619 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
LINC01346-203ENST00000635619 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms