RNA–Protein interactions for RNA: ENST00000634271.1

SMARCA2-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-218ENST00000634271 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 PUS7Q96PZ0 661 aaKnown RBP7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 IRX2Q9BZI1 471 aaPredicted RBP7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 CHMP4BQ9H444 224 aaKnown RBP7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 MYH16Q9H6N6 1097 aa7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 ERVK-7P63135 1459 aa7.22□□□□□ -1.25
SMARCA2-218ENST00000634271 MCM4P33991 863 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 TERF1P54274 439 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 GBP4Q96PP9 640 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 ABCC3O15438 1527 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 LMTK2Q8IWU2 1503 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 UBR1Q8IWV7 1749 aa7.21□□□□□ -1.26
SMARCA2-218ENST00000634271 ABCC11Q96J66 1382 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 KIF3BO15066 747 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 HSP90AA1P07900 732 aaKnown RBP7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 PTPN5P54829 565 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 HSCBQ8IWL3 235 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 RUNDC1Q96C34 613 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 MFRPQ9BY79 579 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 EFCAB6Q5THR3 1501 aa7.2□□□□□ -1.26
SMARCA2-218ENST00000634271 QRICH2Q9H0J4 1663 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 ANKRD26Q9UPS8 1709 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 SLC34A2O95436 690 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 SLC4A3P48751 1232 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 HDAC1Q13547 482 aaPredicted RBP7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 SNX21Q969T3 373 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 CFAP53Q96M91 514 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 BCL11BQ9C0K0 894 aaPredicted RBP7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 POGKQ9P215 609 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 MROH1Q8NDA8 1641 aa7.19□□□□□ -1.26
SMARCA2-218ENST00000634271 ARHGAP31Q2M1Z3 1444 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 ADGRB3O60242 1522 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 TK2O00142 265 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 APAF1O14727 1248 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 RGL3Q3MIN7 710 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 WWC1Q8IX03 1113 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 ANP32BQ92688 251 aaKnown RBP7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 ZNF428Q96B54 188 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 MAP7D2Q96T17 732 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 TBC1D2Q9BYX2 928 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 IL16Q14005 1332 aa7.18□□□□□ -1.26
SMARCA2-218ENST00000634271 ROBO1Q9Y6N7 1651 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 GOLGA6L22H0YM25 854 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 IGHDP01880 384 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 RBM25P49756 843 aaKnown RBP7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 RARSP54136 660 aaKnown RBP7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 HS1BP3Q53T59 392 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 ZKSCAN2Q63HK3 967 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 C22orf23Q9BZE7 217 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 DDX19BQ9UMR2 479 aa7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 SETD1AO15047 1707 aaKnown RBP7.17□□□□□ -1.26
SMARCA2-218ENST00000634271 PPLO60437 1756 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 TRAK2O60296 914 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 BCAR3O75815 825 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 XRCC6P12956 609 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 CCDC173Q0VFZ6 552 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 MTERF4Q7Z6M4 381 aaKnown RBP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 NAP1L5Q96NT1 182 aaPredicted RBP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 GRPEL1Q9HAV7 217 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 RRAGDQ9NQL2 400 aaPredicted RBP7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 STK24Q9Y6E0 443 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 NWD1Q149M9 1564 aa7.16□□□□□ -1.26
SMARCA2-218ENST00000634271 SRCAPQ6ZRS2 3230 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 ESPNB1AK53 854 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 CLEC17AQ6ZS10 378 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 SMC5Q8IY18 1101 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 TMC2Q8TDI7 906 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 PDZRN3Q9UPQ7 1066 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
SMARCA2-218ENST00000634271 CDC42BPGQ6DT37 1551 aa7.15□□□□□ -1.27
SMARCA2-218ENST00000634271 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 A0A0G2JS52 829 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 PSDA5PKW4 1024 aaPredicted RBP7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 IPO8O15397 1037 aaKnown RBP7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 LTKP29376 864 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 TMEM94Q12767 1356 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 FTSJ3Q8IY81 847 aaKnown RBP7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 PKNOX2Q96KN3 472 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 TMEM2Q9UHN6 1383 aa7.14□□□□□ -1.27
SMARCA2-218ENST00000634271 COL16A1Q07092 1604 aaPredicted RBP7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 CDK12Q9NYV4 1490 aaPredicted RBP7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 PPIP5K1Q6PFW1 1433 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 ANKRD36BQ8N2N9 1353 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 JCADQ9P266 1359 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 RPGRIP1LQ68CZ1 1315 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 DDIT3P35638 169 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 SKAP1Q86WV1 359 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 DZIP1LQ8IYY4 767 aaKnown RBP7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 PDCL3Q9H2J4 239 aa7.13□□□□□ -1.27
SMARCA2-218ENST00000634271 ZFYVE9O95405 1425 aa7.12□□□□□ -1.27
SMARCA2-218ENST00000634271 KCNA6P17658 529 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms