RNA–Protein interactions for RNA: ENST00000633179.1

LINC01002-223, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-223ENST00000633179 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
LINC01002-223ENST00000633179 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
LINC01002-223ENST00000633179 ZCRB1Q8TBF4 217 aaKnown RBP16.92■□□□□ 0.3
LINC01002-223ENST00000633179 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
LINC01002-223ENST00000633179 LY75O60449 1722 aa16.92■□□□□ 0.3
LINC01002-223ENST00000633179 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
LINC01002-223ENST00000633179 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
LINC01002-223ENST00000633179 KIF3CO14782 793 aa16.9■□□□□ 0.3
LINC01002-223ENST00000633179 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
LINC01002-223ENST00000633179 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
LINC01002-223ENST00000633179 LTN1O94822 1766 aa16.89■□□□□ 0.3
LINC01002-223ENST00000633179 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
LINC01002-223ENST00000633179 USP47Q96K76 1375 aa16.89■□□□□ 0.29
LINC01002-223ENST00000633179 DNAJC5GQ8N7S2 189 aa16.88■□□□□ 0.29
LINC01002-223ENST00000633179 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
LINC01002-223ENST00000633179 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
LINC01002-223ENST00000633179 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
LINC01002-223ENST00000633179 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
LINC01002-223ENST00000633179 HOXC9P31274 260 aa16.85■□□□□ 0.29
LINC01002-223ENST00000633179 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
LINC01002-223ENST00000633179 MEGF6O75095 1541 aa16.85■□□□□ 0.29
LINC01002-223ENST00000633179 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
LINC01002-223ENST00000633179 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
LINC01002-223ENST00000633179 APLP1P51693 650 aa16.84■□□□□ 0.29
LINC01002-223ENST00000633179 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
LINC01002-223ENST00000633179 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
LINC01002-223ENST00000633179 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
LINC01002-223ENST00000633179 FBLN1P23142 703 aa16.83■□□□□ 0.28
LINC01002-223ENST00000633179 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
LINC01002-223ENST00000633179 FAM208AQ9UK61 1670 aaKnown RBP16.82■□□□□ 0.28
LINC01002-223ENST00000633179 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
LINC01002-223ENST00000633179 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
LINC01002-223ENST00000633179 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
LINC01002-223ENST00000633179 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
LINC01002-223ENST00000633179 WWC3Q9ULE0 1092 aa16.81■□□□□ 0.28
LINC01002-223ENST00000633179 TOMM70O94826 608 aa16.8■□□□□ 0.28
LINC01002-223ENST00000633179 AMPHP49418 695 aa16.8■□□□□ 0.28
LINC01002-223ENST00000633179 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
LINC01002-223ENST00000633179 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
LINC01002-223ENST00000633179 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
LINC01002-223ENST00000633179 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
LINC01002-223ENST00000633179 COG3Q96JB2 828 aa16.78■□□□□ 0.28
LINC01002-223ENST00000633179 C5P01031 1676 aa16.78■□□□□ 0.28
LINC01002-223ENST00000633179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.28
LINC01002-223ENST00000633179 AK7Q96M32 723 aa16.77■□□□□ 0.28
LINC01002-223ENST00000633179 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
LINC01002-223ENST00000633179 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
LINC01002-223ENST00000633179 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
LINC01002-223ENST00000633179 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
LINC01002-223ENST00000633179 CYP27B1O15528 508 aa16.74■□□□□ 0.27
LINC01002-223ENST00000633179 PHF14O94880 888 aa16.74■□□□□ 0.27
LINC01002-223ENST00000633179 SSFA2P28290 1259 aa16.74■□□□□ 0.27
LINC01002-223ENST00000633179 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
LINC01002-223ENST00000633179 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
LINC01002-223ENST00000633179 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
LINC01002-223ENST00000633179 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 RRS1Q15050 365 aaKnown RBP16.73■□□□□ 0.27
LINC01002-223ENST00000633179 COL13A1Q5TAT6 717 aaPredicted RBP16.73■□□□□ 0.27
LINC01002-223ENST00000633179 PIGBQ92521 554 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 RGPD2P0DJD1 1756 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
LINC01002-223ENST00000633179 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
LINC01002-223ENST00000633179 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
LINC01002-223ENST00000633179 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
LINC01002-223ENST00000633179 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
LINC01002-223ENST00000633179 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 SIK1P57059 783 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 TGFB2P61812 414 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
LINC01002-223ENST00000633179 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 RBM46Q8TBY0 533 aaKnown RBP16.7■□□□□ 0.26
LINC01002-223ENST00000633179 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
LINC01002-223ENST00000633179 FYB1O15117 783 aa16.69■□□□□ 0.26
LINC01002-223ENST00000633179 MMP10P09238 476 aa16.69■□□□□ 0.26
LINC01002-223ENST00000633179 INSRP06213 1382 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 PCNTO95613 3336 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 HTRA3P83110 453 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 ITPK1Q13572 414 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 ARHGAP27Q6ZUM4 889 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 TESK2Q96S53 571 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
LINC01002-223ENST00000633179 GNPATO15228 680 aa16.66■□□□□ 0.26
LINC01002-223ENST00000633179 SMG6Q86US8 1419 aaKnown RBP16.66■□□□□ 0.26
LINC01002-223ENST00000633179 FSTL1Q12841 308 aa16.65■□□□□ 0.26
LINC01002-223ENST00000633179 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
LINC01002-223ENST00000633179 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
LINC01002-223ENST00000633179 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
LINC01002-223ENST00000633179 DPEP1P16444 411 aa16.64■□□□□ 0.25
LINC01002-223ENST00000633179 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
LINC01002-223ENST00000633179 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
LINC01002-223ENST00000633179 KCNA3P22001 575 aa16.63■□□□□ 0.25
LINC01002-223ENST00000633179 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
LINC01002-223ENST00000633179 PRELPP51888 382 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms