RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 BAG6P46379 1132 aa18.47■□□□□ 0.55
PFDN5-220ENST00000628881 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
PFDN5-220ENST00000628881 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
PFDN5-220ENST00000628881 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
PFDN5-220ENST00000628881 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
PFDN5-220ENST00000628881 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
PFDN5-220ENST00000628881 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
PFDN5-220ENST00000628881 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
PFDN5-220ENST00000628881 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
PFDN5-220ENST00000628881 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
PFDN5-220ENST00000628881 PCDH11XQ9BZA7 1347 aa18.44■□□□□ 0.54
PFDN5-220ENST00000628881 PCDH11YQ9BZA8 1340 aa18.44■□□□□ 0.54
PFDN5-220ENST00000628881 KDRP35968 1356 aa18.43■□□□□ 0.54
PFDN5-220ENST00000628881 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
PFDN5-220ENST00000628881 APBA3O96018 575 aa18.42■□□□□ 0.54
PFDN5-220ENST00000628881 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
PFDN5-220ENST00000628881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
PFDN5-220ENST00000628881 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
PFDN5-220ENST00000628881 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
PFDN5-220ENST00000628881 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
PFDN5-220ENST00000628881 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
PFDN5-220ENST00000628881 DOT1LQ8TEK3 1739 aa18.4■□□□□ 0.54
PFDN5-220ENST00000628881 RALBP1Q15311 655 aa18.4■□□□□ 0.54
PFDN5-220ENST00000628881 ACSBG1Q96GR2 724 aa18.4■□□□□ 0.54
PFDN5-220ENST00000628881 RGPD3A6NKT7 1758 aaPredicted RBP18.4■□□□□ 0.54
PFDN5-220ENST00000628881 RGPD4Q7Z3J3 1758 aa18.4■□□□□ 0.54
PFDN5-220ENST00000628881 CYP27B1O15528 508 aa18.39■□□□□ 0.53
PFDN5-220ENST00000628881 KCNQ2O43526 872 aa18.39■□□□□ 0.53
PFDN5-220ENST00000628881 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
PFDN5-220ENST00000628881 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
PFDN5-220ENST00000628881 EZH2Q15910 746 aaKnown RBP18.37■□□□□ 0.53
PFDN5-220ENST00000628881 RREB1Q92766 1687 aa18.37■□□□□ 0.53
PFDN5-220ENST00000628881 BTAF1O14981 1849 aa18.36■□□□□ 0.53
PFDN5-220ENST00000628881 PLSCR1O15162 318 aa18.36■□□□□ 0.53
PFDN5-220ENST00000628881 HMOX1P09601 288 aa18.36■□□□□ 0.53
PFDN5-220ENST00000628881 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
PFDN5-220ENST00000628881 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
PFDN5-220ENST00000628881 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
PFDN5-220ENST00000628881 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
PFDN5-220ENST00000628881 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
PFDN5-220ENST00000628881 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
PFDN5-220ENST00000628881 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
PFDN5-220ENST00000628881 PHKG2P15735 406 aa18.34■□□□□ 0.53
PFDN5-220ENST00000628881 PRIM1P49642 420 aaKnown RBP18.34■□□□□ 0.53
PFDN5-220ENST00000628881 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
PFDN5-220ENST00000628881 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.52
PFDN5-220ENST00000628881 NUP188Q5SRE5 1749 aa18.32■□□□□ 0.52
PFDN5-220ENST00000628881 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
PFDN5-220ENST00000628881 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
PFDN5-220ENST00000628881 ITGB4P16144 1822 aa18.3■□□□□ 0.52
PFDN5-220ENST00000628881 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
PFDN5-220ENST00000628881 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
PFDN5-220ENST00000628881 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
PFDN5-220ENST00000628881 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
PFDN5-220ENST00000628881 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
PFDN5-220ENST00000628881 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
PFDN5-220ENST00000628881 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
PFDN5-220ENST00000628881 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
PFDN5-220ENST00000628881 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
PFDN5-220ENST00000628881 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
PFDN5-220ENST00000628881 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
PFDN5-220ENST00000628881 PROM2Q8N271 834 aa18.27■□□□□ 0.52
PFDN5-220ENST00000628881 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
PFDN5-220ENST00000628881 LY75O60449 1722 aa18.26■□□□□ 0.51
PFDN5-220ENST00000628881 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
PFDN5-220ENST00000628881 FCHSD2O94868 740 aa18.25■□□□□ 0.51
PFDN5-220ENST00000628881 PRKAR2BP31323 418 aa18.25■□□□□ 0.51
PFDN5-220ENST00000628881 PIGBQ92521 554 aa18.24■□□□□ 0.51
PFDN5-220ENST00000628881 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
PFDN5-220ENST00000628881 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
PFDN5-220ENST00000628881 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
PFDN5-220ENST00000628881 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
PFDN5-220ENST00000628881 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
PFDN5-220ENST00000628881 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
PFDN5-220ENST00000628881 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
PFDN5-220ENST00000628881 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
PFDN5-220ENST00000628881 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
PFDN5-220ENST00000628881 SMARCC1Q92922 1105 aaPredicted RBP18.21■□□□□ 0.51
PFDN5-220ENST00000628881 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
PFDN5-220ENST00000628881 CABP4P57796 275 aa18.2■□□□□ 0.5
PFDN5-220ENST00000628881 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
PFDN5-220ENST00000628881 LRRC4BQ9NT99 713 aa18.2■□□□□ 0.5
PFDN5-220ENST00000628881 MRC1P22897 1456 aa18.2■□□□□ 0.5
PFDN5-220ENST00000628881 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
PFDN5-220ENST00000628881 PSDA5PKW4 1024 aaPredicted RBP18.19■□□□□ 0.5
PFDN5-220ENST00000628881 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
PFDN5-220ENST00000628881 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
PFDN5-220ENST00000628881 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
PFDN5-220ENST00000628881 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
PFDN5-220ENST00000628881 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
PFDN5-220ENST00000628881 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
PFDN5-220ENST00000628881 ANP32CO43423 234 aa18.17■□□□□ 0.5
PFDN5-220ENST00000628881 NEFMP07197 916 aa18.17■□□□□ 0.5
PFDN5-220ENST00000628881 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
PFDN5-220ENST00000628881 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
PFDN5-220ENST00000628881 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
PFDN5-220ENST00000628881 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
PFDN5-220ENST00000628881 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
PFDN5-220ENST00000628881 ATG3Q9NT62 314 aa18.16■□□□□ 0.5
PFDN5-220ENST00000628881 KCNQ4P56696 695 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms