RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
CHRNA4-210ENST00000627869 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
CHRNA4-210ENST00000627869 ARXQ96QS3 562 aa16.24■□□□□ 0.19
CHRNA4-210ENST00000627869 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
CHRNA4-210ENST00000627869 NHSQ6T4R5 1651 aa16.22■□□□□ 0.19
CHRNA4-210ENST00000627869 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
CHRNA4-210ENST00000627869 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
CHRNA4-210ENST00000627869 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
CHRNA4-210ENST00000627869 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
CHRNA4-210ENST00000627869 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
CHRNA4-210ENST00000627869 LTN1O94822 1766 aa16.2■□□□□ 0.18
CHRNA4-210ENST00000627869 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
CHRNA4-210ENST00000627869 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
CHRNA4-210ENST00000627869 GPR162Q16538 588 aa16.18■□□□□ 0.18
CHRNA4-210ENST00000627869 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
CHRNA4-210ENST00000627869 SMG6Q86US8 1419 aaKnown RBP16.18■□□□□ 0.18
CHRNA4-210ENST00000627869 CGNL1Q0VF96 1302 aa16.18■□□□□ 0.18
CHRNA4-210ENST00000627869 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
CHRNA4-210ENST00000627869 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
CHRNA4-210ENST00000627869 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 BTAF1O14981 1849 aa16.16■□□□□ 0.18
CHRNA4-210ENST00000627869 INSRP06213 1382 aa16.15■□□□□ 0.18
CHRNA4-210ENST00000627869 FLT4P35916 1363 aa16.15■□□□□ 0.18
CHRNA4-210ENST00000627869 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
CHRNA4-210ENST00000627869 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
CHRNA4-210ENST00000627869 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
CHRNA4-210ENST00000627869 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 RAPGEF4Q8WZA2 1011 aa16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 EMILIN1Q9Y6C2 1016 aa16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
CHRNA4-210ENST00000627869 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-210ENST00000627869 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
CHRNA4-210ENST00000627869 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 PANK3Q9H999 370 aa16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
CHRNA4-210ENST00000627869 MEGF6O75095 1541 aa16.1■□□□□ 0.17
CHRNA4-210ENST00000627869 PNPLA7Q6ZV29 1317 aa16.1■□□□□ 0.17
CHRNA4-210ENST00000627869 PRIM1P49642 420 aaKnown RBP16.09■□□□□ 0.17
CHRNA4-210ENST00000627869 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
CHRNA4-210ENST00000627869 POLKQ9UBT6 870 aa16.08■□□□□ 0.16
CHRNA4-210ENST00000627869 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.16
CHRNA4-210ENST00000627869 ATP10DQ9P241 1426 aa16.07■□□□□ 0.16
CHRNA4-210ENST00000627869 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
CHRNA4-210ENST00000627869 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
CHRNA4-210ENST00000627869 KCNQ4P56696 695 aa16.06■□□□□ 0.16
CHRNA4-210ENST00000627869 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
CHRNA4-210ENST00000627869 SLC16A10Q8TF71 515 aa16.06■□□□□ 0.16
CHRNA4-210ENST00000627869 NSD2O96028 1365 aa16.04■□□□□ 0.16
CHRNA4-210ENST00000627869 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
CHRNA4-210ENST00000627869 POLD1P28340 1107 aa16.03■□□□□ 0.16
CHRNA4-210ENST00000627869 EYA1Q99502 592 aa16.03■□□□□ 0.16
CHRNA4-210ENST00000627869 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
CHRNA4-210ENST00000627869 CYP27B1O15528 508 aa16.02■□□□□ 0.16
CHRNA4-210ENST00000627869 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
CHRNA4-210ENST00000627869 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
CHRNA4-210ENST00000627869 ADCY9O60503 1353 aa16.01■□□□□ 0.15
CHRNA4-210ENST00000627869 HSPA6P17066 643 aa16.01■□□□□ 0.15
CHRNA4-210ENST00000627869 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
CHRNA4-210ENST00000627869 LY75O60449 1722 aa16.01■□□□□ 0.15
CHRNA4-210ENST00000627869 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
CHRNA4-210ENST00000627869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
CHRNA4-210ENST00000627869 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
CHRNA4-210ENST00000627869 PER1O15534 1290 aaPredicted RBP15.99■□□□□ 0.15
CHRNA4-210ENST00000627869 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
CHRNA4-210ENST00000627869 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CHRNA4-210ENST00000627869 TFCP2L1Q9NZI6 479 aa15.99■□□□□ 0.15
CHRNA4-210ENST00000627869 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
CHRNA4-210ENST00000627869 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
CHRNA4-210ENST00000627869 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
CHRNA4-210ENST00000627869 GPBP1L1Q9HC44 474 aaPredicted RBP15.97■□□□□ 0.15
CHRNA4-210ENST00000627869 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
CHRNA4-210ENST00000627869 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
CHRNA4-210ENST00000627869 COL23A1Q86Y22 540 aaPredicted RBP15.96■□□□□ 0.15
CHRNA4-210ENST00000627869 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
CHRNA4-210ENST00000627869 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
CHRNA4-210ENST00000627869 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
CHRNA4-210ENST00000627869 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
CHRNA4-210ENST00000627869 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
CHRNA4-210ENST00000627869 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
CHRNA4-210ENST00000627869 PHKG2P15735 406 aa15.94■□□□□ 0.14
CHRNA4-210ENST00000627869 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
CHRNA4-210ENST00000627869 PIGBQ92521 554 aa15.94■□□□□ 0.14
CHRNA4-210ENST00000627869 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
CHRNA4-210ENST00000627869 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
CHRNA4-210ENST00000627869 NPC1L1Q9UHC9 1359 aa15.93■□□□□ 0.14
CHRNA4-210ENST00000627869 KIF3CO14782 793 aa15.92■□□□□ 0.14
CHRNA4-210ENST00000627869 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
CHRNA4-210ENST00000627869 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
CHRNA4-210ENST00000627869 PCNTO95613 3336 aa15.91■□□□□ 0.14
CHRNA4-210ENST00000627869 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
CHRNA4-210ENST00000627869 MSH5O43196 834 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms