RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 R3HDM1Q15032 1099 aaKnown RBP11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
SPTAN1-213ENST00000627809 FLT4P35916 1363 aa11.21□□□□□ -0.61
SPTAN1-213ENST00000627809 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
SPTAN1-213ENST00000627809 INSRP06213 1382 aa11.2□□□□□ -0.62
SPTAN1-213ENST00000627809 IL2RBP14784 551 aa11.2□□□□□ -0.62
SPTAN1-213ENST00000627809 BAG6P46379 1132 aa11.2□□□□□ -0.62
SPTAN1-213ENST00000627809 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-213ENST00000627809 BCL9O00512 1426 aa11.19□□□□□ -0.62
SPTAN1-213ENST00000627809 PPM1GO15355 546 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-213ENST00000627809 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
SPTAN1-213ENST00000627809 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-213ENST00000627809 EIF4A2Q14240 407 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-213ENST00000627809 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
SPTAN1-213ENST00000627809 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-213ENST00000627809 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-213ENST00000627809 C5P01031 1676 aa11.17□□□□□ -0.62
SPTAN1-213ENST00000627809 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
SPTAN1-213ENST00000627809 CYP27B1O15528 508 aa11.17□□□□□ -0.62
SPTAN1-213ENST00000627809 EYA1Q99502 592 aa11.17□□□□□ -0.62
SPTAN1-213ENST00000627809 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
SPTAN1-213ENST00000627809 EXOC5O00471 708 aa11.16□□□□□ -0.62
SPTAN1-213ENST00000627809 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-213ENST00000627809 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
SPTAN1-213ENST00000627809 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
SPTAN1-213ENST00000627809 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.62
SPTAN1-213ENST00000627809 SMIM5Q71RC9 77 aa11.15□□□□□ -0.62
SPTAN1-213ENST00000627809 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
SPTAN1-213ENST00000627809 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
SPTAN1-213ENST00000627809 QSER1Q2KHR3 1735 aa11.15□□□□□ -0.63
SPTAN1-213ENST00000627809 AMIGO3Q86WK7 504 aa11.14□□□□□ -0.63
SPTAN1-213ENST00000627809 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
SPTAN1-213ENST00000627809 COL24A1Q17RW2 1714 aa11.13□□□□□ -0.63
SPTAN1-213ENST00000627809 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-213ENST00000627809 TXNRD1Q16881 649 aa11.13□□□□□ -0.63
SPTAN1-213ENST00000627809 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-213ENST00000627809 KDM6AO15550 1401 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-213ENST00000627809 ZCRB1Q8TBF4 217 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-213ENST00000627809 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-213ENST00000627809 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
SPTAN1-213ENST00000627809 COL5A3P25940 1745 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-213ENST00000627809 TJP1Q07157 1748 aa11.11□□□□□ -0.63
SPTAN1-213ENST00000627809 KIF24Q5T7B8 1368 aa11.11□□□□□ -0.63
SPTAN1-213ENST00000627809 DLG5Q8TDM6 1919 aa11.1□□□□□ -0.63
SPTAN1-213ENST00000627809 PLSCR1O15162 318 aa11.1□□□□□ -0.63
SPTAN1-213ENST00000627809 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
SPTAN1-213ENST00000627809 ADAMTS7Q9UKP4 1686 aa11.1□□□□□ -0.63
SPTAN1-213ENST00000627809 SIPA1L3O60292 1781 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-213ENST00000627809 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
SPTAN1-213ENST00000627809 IL13P35225 146 aa11.09□□□□□ -0.63
SPTAN1-213ENST00000627809 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
SPTAN1-213ENST00000627809 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-213ENST00000627809 MTHFSP49914 203 aa11.08□□□□□ -0.64
SPTAN1-213ENST00000627809 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
SPTAN1-213ENST00000627809 ZBTB7AO95365 584 aa11.07□□□□□ -0.64
SPTAN1-213ENST00000627809 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-213ENST00000627809 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
SPTAN1-213ENST00000627809 UTRNP46939 3433 aa11.07□□□□□ -0.64
SPTAN1-213ENST00000627809 HMOX1P09601 288 aa11.06□□□□□ -0.64
SPTAN1-213ENST00000627809 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
SPTAN1-213ENST00000627809 PIGBQ92521 554 aa11.06□□□□□ -0.64
SPTAN1-213ENST00000627809 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
SPTAN1-213ENST00000627809 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
SPTAN1-213ENST00000627809 KDRP35968 1356 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 PHKG2P15735 406 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 PTGER2P43116 358 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 UBR2Q8IWV8 1755 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 PNPLA7Q6ZV29 1317 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
SPTAN1-213ENST00000627809 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 SULT6B1Q6IMI4 303 aa11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 MPRIPQ6WCQ1 1025 aa11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 ASAP1Q9ULH1 1129 aa11.04□□□□□ -0.64
SPTAN1-213ENST00000627809 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
SPTAN1-213ENST00000627809 ITPK1Q13572 414 aa11.03□□□□□ -0.64
SPTAN1-213ENST00000627809 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
SPTAN1-213ENST00000627809 KIAA1551Q9HCM1 1747 aa11.02□□□□□ -0.65
SPTAN1-213ENST00000627809 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
SPTAN1-213ENST00000627809 MRC1P22897 1456 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 ZNF530Q6P9A1 599 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 LINC00116Q8NCU8 138 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
SPTAN1-213ENST00000627809 PPP2R1AP30153 589 aa11□□□□□ -0.65
SPTAN1-213ENST00000627809 MSL1Q68DK7 614 aa11□□□□□ -0.65
SPTAN1-213ENST00000627809 CCNL1Q9UK58 526 aaPredicted RBP11□□□□□ -0.65
SPTAN1-213ENST00000627809 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-213ENST00000627809 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
SPTAN1-213ENST00000627809 COL23A1Q86Y22 540 aaPredicted RBP10.99□□□□□ -0.65
SPTAN1-213ENST00000627809 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
SPTAN1-213ENST00000627809 NBPF14Q5TI25 921 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms