RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 K7ELQ4 463 aaPredicted RBP23.82■■□□□ 1.4
PTBP1-220ENST00000627714 PLEKHM2Q8IWE5 1019 aa23.82■■□□□ 1.4
PTBP1-220ENST00000627714 ARHGEF10O15013 1369 aa23.82■■□□□ 1.4
PTBP1-220ENST00000627714 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
PTBP1-220ENST00000627714 RAB3GAP1Q15042 981 aa23.8■■□□□ 1.4
PTBP1-220ENST00000627714 TTC22Q5TAA0 569 aa23.8■■□□□ 1.4
PTBP1-220ENST00000627714 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
PTBP1-220ENST00000627714 GSPT1P15170 499 aaKnown RBP23.79■■□□□ 1.4
PTBP1-220ENST00000627714 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
PTBP1-220ENST00000627714 HSP90AA1P07900 732 aaKnown RBP23.79■■□□□ 1.4
PTBP1-220ENST00000627714 CRB1P82279 1406 aa23.78■■□□□ 1.4
PTBP1-220ENST00000627714 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
PTBP1-220ENST00000627714 TNPO1Q92973 898 aaKnown RBP23.78■■□□□ 1.4
PTBP1-220ENST00000627714 FMN2Q9NZ56 1722 aa23.78■■□□□ 1.4
PTBP1-220ENST00000627714 CEP85Q6P2H3 762 aa23.78■■□□□ 1.4
PTBP1-220ENST00000627714 RTL1A6NKG5 1358 aa23.77■■□□□ 1.4
PTBP1-220ENST00000627714 SKOR2Q2VWA4 1001 aaPredicted RBP23.77■■□□□ 1.4
PTBP1-220ENST00000627714 MCM10Q7L590 875 aa23.77■■□□□ 1.4
PTBP1-220ENST00000627714 MSH6P52701 1360 aa23.76■■□□□ 1.39
PTBP1-220ENST00000627714 MRE11P49959 708 aa23.76■■□□□ 1.39
PTBP1-220ENST00000627714 RABEP1Q15276 862 aa23.76■■□□□ 1.39
PTBP1-220ENST00000627714 HSP90AB2PQ58FF8 381 aa23.76■■□□□ 1.39
PTBP1-220ENST00000627714 XRCC6P12956 609 aaKnown RBP eCLIP23.75■■□□□ 1.395e-10■□□□□ 9.2
PTBP1-220ENST00000627714 CASC1Q6TDU7 716 aa23.75■■□□□ 1.39
PTBP1-220ENST00000627714 GZF1Q9H116 711 aaPredicted RBP23.74■■□□□ 1.39
PTBP1-220ENST00000627714 SBNO1A3KN83 1393 aa23.74■■□□□ 1.39
PTBP1-220ENST00000627714 FLT4P35916 1363 aa23.74■■□□□ 1.39
PTBP1-220ENST00000627714 KDRP35968 1356 aa23.73■■□□□ 1.39
PTBP1-220ENST00000627714 HMMRO75330 724 aa23.73■■□□□ 1.39
PTBP1-220ENST00000627714 KRT24Q2M2I5 525 aa23.73■■□□□ 1.39
PTBP1-220ENST00000627714 CD2BP2O95400 341 aaKnown RBP23.72■■□□□ 1.39
PTBP1-220ENST00000627714 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
PTBP1-220ENST00000627714 CCT4P50991 539 aaKnown RBP23.71■■□□□ 1.39
PTBP1-220ENST00000627714 CLEC17AQ6ZS10 378 aa23.71■■□□□ 1.39
PTBP1-220ENST00000627714 SLC4A2P04920 1241 aa23.7■■□□□ 1.38
PTBP1-220ENST00000627714 LTKP29376 864 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 MAP3K19Q56UN5 1328 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 PTPRUQ92729 1446 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 MEIS3Q99687 375 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 USP26Q9BXU7 913 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
PTBP1-220ENST00000627714 RIMS1Q86UR5 1692 aaKnown RBP23.69■■□□□ 1.38
PTBP1-220ENST00000627714 RBM42Q9BTD8 480 aaKnown RBP23.68■■□□□ 1.38
PTBP1-220ENST00000627714 GOLGA6L22H0YM25 854 aa23.68■■□□□ 1.38
PTBP1-220ENST00000627714 HTATSF1O43719 755 aaKnown RBP23.68■■□□□ 1.38
PTBP1-220ENST00000627714 TSPYL4Q9UJ04 414 aa23.68■■□□□ 1.38
PTBP1-220ENST00000627714 SLIT1O75093 1534 aa23.67■■□□□ 1.38
PTBP1-220ENST00000627714 IGSF1Q8N6C5 1336 aa23.67■■□□□ 1.38
PTBP1-220ENST00000627714 C16orf71Q8IYS4 520 aaPredicted RBP23.67■■□□□ 1.38
PTBP1-220ENST00000627714 SDSP20132 328 aa23.66■■□□□ 1.38
PTBP1-220ENST00000627714 MTHFSDQ2M296 383 aaKnown RBP23.66■■□□□ 1.38
PTBP1-220ENST00000627714 REC8O95072 547 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 GRPEL1Q9HAV7 217 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 LRRC37A3O60309 1634 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
PTBP1-220ENST00000627714 NUTM2FA1L443 756 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
PTBP1-220ENST00000627714 TBX22Q9Y458 520 aa23.64■■□□□ 1.38
PTBP1-220ENST00000627714 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
PTBP1-220ENST00000627714 NUCB2P80303 420 aa23.63■■□□□ 1.37
PTBP1-220ENST00000627714 OTUD7AQ8TE49 926 aaPredicted RBP23.63■■□□□ 1.37
PTBP1-220ENST00000627714 STK31Q9BXU1 1019 aa23.63■■□□□ 1.37
PTBP1-220ENST00000627714 DNAJC5Q9H3Z4 198 aa23.63■■□□□ 1.37
PTBP1-220ENST00000627714 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
PTBP1-220ENST00000627714 ARXQ96QS3 562 aa23.62■■□□□ 1.37
PTBP1-220ENST00000627714 PIK3C2AO00443 1686 aa23.62■■□□□ 1.37
PTBP1-220ENST00000627714 ST18O60284 1047 aa23.61■■□□□ 1.37
PTBP1-220ENST00000627714 AMPHP49418 695 aa23.61■■□□□ 1.37
PTBP1-220ENST00000627714 FOXD4L1Q9NU39 408 aa23.61■■□□□ 1.37
PTBP1-220ENST00000627714 GNAI2P04899 355 aa23.61■■□□□ 1.37
PTBP1-220ENST00000627714 NGDNQ8NEJ9 315 aaKnown RBP23.61■■□□□ 1.37
PTBP1-220ENST00000627714 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
PTBP1-220ENST00000627714 CWC22Q9HCG8 908 aaKnown RBP23.61■■□□□ 1.37
PTBP1-220ENST00000627714 SMARCA5O60264 1052 aaPredicted RBP23.6■■□□□ 1.37
PTBP1-220ENST00000627714 PANK2Q9BZ23 570 aa23.6■■□□□ 1.37
PTBP1-220ENST00000627714 CEP170BQ9Y4F5 1589 aaPredicted RBP23.6■■□□□ 1.37
PTBP1-220ENST00000627714 FAM208AQ9UK61 1670 aaKnown RBP23.6■■□□□ 1.37
PTBP1-220ENST00000627714 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
PTBP1-220ENST00000627714 SOX12O15370 315 aa23.6■■□□□ 1.37
PTBP1-220ENST00000627714 FOXO3O43524 673 aa23.6■■□□□ 1.37
PTBP1-220ENST00000627714 EYA1Q99502 592 aa23.6■■□□□ 1.37
PTBP1-220ENST00000627714 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 USP54Q70EL1 1684 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 ERC2O15083 957 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 SSFA2P28290 1259 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 IBTKQ9P2D0 1353 aaPredicted RBP23.59■■□□□ 1.37
PTBP1-220ENST00000627714 GNAI3P08754 354 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 CCDC30Q5VVM6 783 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 SLC4A10Q6U841 1118 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
PTBP1-220ENST00000627714 G2E3Q7L622 706 aa23.58■■□□□ 1.37
PTBP1-220ENST00000627714 RRAGDQ9NQL2 400 aaPredicted RBP23.58■■□□□ 1.37
PTBP1-220ENST00000627714 N4BP2Q86UW6 1770 aaPredicted RBP23.58■■□□□ 1.36
PTBP1-220ENST00000627714 APBB1O00213 710 aa23.57■■□□□ 1.36
PTBP1-220ENST00000627714 PDE1AP54750 535 aa23.57■■□□□ 1.36
PTBP1-220ENST00000627714 BAG4O95429 457 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms