RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 CCDC83Q8IWF9 413 aa21■□□□□ 0.95
FARP1-242ENST00000627049 COL17A1Q9UMD9 1497 aaPredicted RBP21■□□□□ 0.95
FARP1-242ENST00000627049 IPO7O95373 1038 aaKnown RBP21■□□□□ 0.95
FARP1-242ENST00000627049 FERMT3Q86UX7 667 aa21■□□□□ 0.95
FARP1-242ENST00000627049 PTPN14Q15678 1187 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 ANKRD20A12PQ8NF67 263 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 CFAP45Q9UL16 551 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 TNNT1P13805 278 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 HCLS1P14317 486 aaPredicted RBP20.99■□□□□ 0.95
FARP1-242ENST00000627049 ZBTB40Q9NUA8 1239 aa20.99■□□□□ 0.95
FARP1-242ENST00000627049 CGNQ9P2M7 1197 aaKnown RBP20.98■□□□□ 0.95
FARP1-242ENST00000627049 SRGAP3O43295 1099 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 AKAP17AQ02040 695 aaKnown RBP20.98■□□□□ 0.95
FARP1-242ENST00000627049 CEP57L1Q8IYX8 460 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 NOL7Q9UMY1 257 aaKnown RBP20.98■□□□□ 0.95
FARP1-242ENST00000627049 SDSP20132 328 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 ME1P48163 572 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 DCTN1Q14203 1278 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 STK38Q15208 465 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 ZNF830Q96NB3 372 aaPredicted RBP20.98■□□□□ 0.95
FARP1-242ENST00000627049 LIMCH1Q9UPQ0 1083 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
FARP1-242ENST00000627049 ERICH4A6NGS2 130 aa20.97■□□□□ 0.95
FARP1-242ENST00000627049 SPDYE4A6NLX3 237 aa20.97■□□□□ 0.95
FARP1-242ENST00000627049 C16orf45Q96MC5 204 aaPredicted RBP20.97■□□□□ 0.95
FARP1-242ENST00000627049 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
FARP1-242ENST00000627049 KIF2AO00139 706 aaPredicted RBP20.97■□□□□ 0.95
FARP1-242ENST00000627049 UBE2HP62256 183 aa20.97■□□□□ 0.95
FARP1-242ENST00000627049 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
FARP1-242ENST00000627049 SCAND2PQ9GZW5 306 aaPredicted RBP20.97■□□□□ 0.95
FARP1-242ENST00000627049 RALYLQ86SE5 291 aaKnown RBP20.96■□□□□ 0.95
FARP1-242ENST00000627049 AK7Q96M32 723 aa20.96■□□□□ 0.95
FARP1-242ENST00000627049 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
FARP1-242ENST00000627049 RIC3Q7Z5B4 369 aa20.95■□□□□ 0.94
FARP1-242ENST00000627049 SH2B1Q9NRF2 756 aaPredicted RBP20.95■□□□□ 0.94
FARP1-242ENST00000627049 STX6O43752 255 aa20.95■□□□□ 0.94
FARP1-242ENST00000627049 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.94
FARP1-242ENST00000627049 LEKR1Q6ZMV7 388 aa20.95■□□□□ 0.94
FARP1-242ENST00000627049 KIF18AQ8NI77 898 aa20.95■□□□□ 0.94
FARP1-242ENST00000627049 NEUROD6Q96NK8 337 aa20.94■□□□□ 0.94
FARP1-242ENST00000627049 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
FARP1-242ENST00000627049 APPP05067 770 aa20.94■□□□□ 0.94
FARP1-242ENST00000627049 TERF1P54274 439 aa20.94■□□□□ 0.94
FARP1-242ENST00000627049 CCDC94Q9BW85 323 aaPredicted RBP20.94■□□□□ 0.94
FARP1-242ENST00000627049 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
FARP1-242ENST00000627049 UBXN4Q92575 508 aa20.94■□□□□ 0.94
FARP1-242ENST00000627049 SERPINC1P01008 464 aa20.93■□□□□ 0.94
FARP1-242ENST00000627049 CLIP2Q9UDT6 1046 aa20.93■□□□□ 0.94
FARP1-242ENST00000627049 RBSNQ9H1K0 784 aa20.93■□□□□ 0.94
FARP1-242ENST00000627049 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
FARP1-242ENST00000627049 SAFBQ15424 915 aaKnown RBP eCLIP20.93■□□□□ 0.945e-8■■■□□ 16.1
FARP1-242ENST00000627049 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
FARP1-242ENST00000627049 ERCC4Q92889 916 aaPredicted RBP20.92■□□□□ 0.94
FARP1-242ENST00000627049 FAM135AQ9P2D6 1515 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 KIF1BPQ96EK5 621 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 TTC12Q9H892 705 aaPredicted RBP20.92■□□□□ 0.94
FARP1-242ENST00000627049 NFXL1Q6ZNB6 911 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 CKAP2LQ8IYA6 745 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 MBIPQ9NS73 344 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 MCM10Q7L590 875 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 CARD14Q9BXL6 1004 aa20.92■□□□□ 0.94
FARP1-242ENST00000627049 NUP153P49790 1475 aaKnown RBP20.91■□□□□ 0.94
FARP1-242ENST00000627049 PRPF40BQ6NWY9 871 aaKnown RBP20.91■□□□□ 0.94
FARP1-242ENST00000627049 RAB11FIP3O75154 756 aa20.91■□□□□ 0.94
FARP1-242ENST00000627049 TTC5Q8N0Z6 440 aa20.91■□□□□ 0.94
FARP1-242ENST00000627049 ZGPATQ8N5A5 531 aaKnown RBP20.91■□□□□ 0.94
FARP1-242ENST00000627049 DNAJC2Q99543 621 aaKnown RBP20.91■□□□□ 0.94
FARP1-242ENST00000627049 RTEL1-TNFRSF6BF6WH68 1400 aa20.91■□□□□ 0.94
FARP1-242ENST00000627049 GLRX3O76003 335 aaKnown RBP20.91■□□□□ 0.94
FARP1-242ENST00000627049 USP48Q86UV5 1035 aa20.91■□□□□ 0.94
FARP1-242ENST00000627049 PTPRCP08575 1304 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 NPC1L1Q9UHC9 1359 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 FSD2A1L4K1 749 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 ZNF445P59923 1031 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
FARP1-242ENST00000627049 NLRP6P59044 892 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 GIMAP6Q6P9H5 292 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 F6X3S4 739 aa20.9■□□□□ 0.94
FARP1-242ENST00000627049 TMCO3Q6UWJ1 677 aa20.89■□□□□ 0.94
FARP1-242ENST00000627049 SMAP1Q8IYB5 467 aaPredicted RBP20.89■□□□□ 0.94
FARP1-242ENST00000627049 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.94
FARP1-242ENST00000627049 AACSQ86V21 672 aa20.89■□□□□ 0.93
FARP1-242ENST00000627049 DDX19AQ9NUU7 478 aaKnown RBP20.89■□□□□ 0.93
FARP1-242ENST00000627049 NEMFO60524 1076 aa20.89■□□□□ 0.93
FARP1-242ENST00000627049 KRT32Q14532 448 aa20.89■□□□□ 0.93
FARP1-242ENST00000627049 WASHC4Q2M389 1173 aa20.89■□□□□ 0.93
FARP1-242ENST00000627049 FAM177A1Q8N128 213 aaPredicted RBP20.89■□□□□ 0.93
FARP1-242ENST00000627049 ANKRD44Q8N8A2 993 aa20.89■□□□□ 0.93
FARP1-242ENST00000627049 LARP6Q9BRS8 491 aaKnown RBP20.89■□□□□ 0.93
FARP1-242ENST00000627049 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
FARP1-242ENST00000627049 CALCOCO1Q9P1Z2 691 aa20.88■□□□□ 0.93
FARP1-242ENST00000627049 DNMT1P26358 1616 aaKnown RBP20.88■□□□□ 0.93
FARP1-242ENST00000627049 C14orf93Q9H972 538 aaKnown RBP20.88■□□□□ 0.93
FARP1-242ENST00000627049 EIF2AK4Q9P2K8 1649 aaKnown RBP20.88■□□□□ 0.93
FARP1-242ENST00000627049 MRPL50Q8N5N7 158 aaKnown RBP20.88■□□□□ 0.93
FARP1-242ENST00000627049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.88■□□□□ 0.93
FARP1-242ENST00000627049 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
FARP1-242ENST00000627049 PAXBP1Q9Y5B6 917 aa20.88■□□□□ 0.93
FARP1-242ENST00000627049 SFPQP23246 707 aaKnown RBP eCLIP20.87■□□□□ 0.936e-7■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms