RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 APBA3O96018 575 aa27.06■■□□□ 1.92
PNKP-219ENST00000626274 IGSF1Q8N6C5 1336 aa27.06■■□□□ 1.92
PNKP-219ENST00000626274 DDX10Q13206 875 aaKnown RBP27.05■■□□□ 1.92
PNKP-219ENST00000626274 BCL11BQ9C0K0 894 aaPredicted RBP27.04■■□□□ 1.92
PNKP-219ENST00000626274 IL13P35225 146 aa27.03■■□□□ 1.92
PNKP-219ENST00000626274 EN1Q05925 392 aaPredicted RBP27.03■■□□□ 1.92
PNKP-219ENST00000626274 PKD1L3Q7Z443 1732 aa27.03■■□□□ 1.92
PNKP-219ENST00000626274 NHSQ6T4R5 1651 aa27.01■■□□□ 1.92
PNKP-219ENST00000626274 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
PNKP-219ENST00000626274 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
PNKP-219ENST00000626274 DIAPH1O60610 1272 aaKnown RBP26.99■■□□□ 1.91
PNKP-219ENST00000626274 PTF1AQ7RTS3 328 aa26.99■■□□□ 1.91
PNKP-219ENST00000626274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.99■■□□□ 1.91
PNKP-219ENST00000626274 SPG7Q9UQ90 795 aa26.99■■□□□ 1.91
PNKP-219ENST00000626274 PPP2R1AP30153 589 aa26.98■■□□□ 1.91
PNKP-219ENST00000626274 ACSBG1Q96GR2 724 aa26.98■■□□□ 1.91
PNKP-219ENST00000626274 CAMKK2Q96RR4 588 aa26.98■■□□□ 1.91
PNKP-219ENST00000626274 PARD3Q8TEW0 1356 aa26.97■■□□□ 1.91
PNKP-219ENST00000626274 PLEKHG2Q9H7P9 1386 aa26.97■■□□□ 1.91
PNKP-219ENST00000626274 KCNQ2O43526 872 aa26.97■■□□□ 1.91
PNKP-219ENST00000626274 EZH2Q15910 746 aaKnown RBP26.96■■□□□ 1.91
PNKP-219ENST00000626274 SULT6B1Q6IMI4 303 aa26.96■■□□□ 1.91
PNKP-219ENST00000626274 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
PNKP-219ENST00000626274 COL3A1P02461 1466 aaPredicted RBP26.95■■□□□ 1.91
PNKP-219ENST00000626274 RGPD3A6NKT7 1758 aaPredicted RBP26.95■■□□□ 1.9
PNKP-219ENST00000626274 RGPD4Q7Z3J3 1758 aa26.95■■□□□ 1.9
PNKP-219ENST00000626274 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
PNKP-219ENST00000626274 PLSCR1O15162 318 aa26.94■■□□□ 1.9
PNKP-219ENST00000626274 CYP27B1O15528 508 aa26.94■■□□□ 1.9
PNKP-219ENST00000626274 AEBP1Q8IUX7 1158 aa26.94■■□□□ 1.9
PNKP-219ENST00000626274 KDRP35968 1356 aa26.94■■□□□ 1.9
PNKP-219ENST00000626274 BTAF1O14981 1849 aa26.93■■□□□ 1.9
PNKP-219ENST00000626274 RREB1Q92766 1687 aa26.92■■□□□ 1.9
PNKP-219ENST00000626274 PRIM1P49642 420 aaKnown RBP26.9■■□□□ 1.9
PNKP-219ENST00000626274 PLEKHO1Q53GL0 409 aaPredicted RBP26.9■■□□□ 1.9
PNKP-219ENST00000626274 ZNF316A6NFI3 1004 aaPredicted RBP26.89■■□□□ 1.9
PNKP-219ENST00000626274 AMOTQ4VCS5 1084 aa26.89■■□□□ 1.9
PNKP-219ENST00000626274 SYTL4Q96C24 671 aaPredicted RBP26.89■■□□□ 1.9
PNKP-219ENST00000626274 HMOX1P09601 288 aa26.88■■□□□ 1.89
PNKP-219ENST00000626274 IFNL2Q8IZJ0 200 aa26.88■■□□□ 1.89
PNKP-219ENST00000626274 U2SURPO15042 1029 aaKnown RBP26.87■■□□□ 1.89
PNKP-219ENST00000626274 PHKG2P15735 406 aa26.87■■□□□ 1.89
PNKP-219ENST00000626274 NKX1-1Q15270 411 aaPredicted RBP26.87■■□□□ 1.89
PNKP-219ENST00000626274 RALBP1Q15311 655 aa26.87■■□□□ 1.89
PNKP-219ENST00000626274 NUP188Q5SRE5 1749 aa26.87■■□□□ 1.89
PNKP-219ENST00000626274 ITGB4P16144 1822 aa26.86■■□□□ 1.89
PNKP-219ENST00000626274 NUDCQ9Y266 331 aa26.85■■□□□ 1.89
PNKP-219ENST00000626274 TOGARAM1Q9Y4F4 1720 aa26.84■■□□□ 1.89
PNKP-219ENST00000626274 ZNF530Q6P9A1 599 aaPredicted RBP26.83■■□□□ 1.89
PNKP-219ENST00000626274 TXNRD1Q16881 649 aa26.81■■□□□ 1.88
PNKP-219ENST00000626274 PROM2Q8N271 834 aa26.81■■□□□ 1.88
PNKP-219ENST00000626274 HSP90AB1P08238 724 aaKnown RBP26.8■■□□□ 1.88
PNKP-219ENST00000626274 C1orf141Q5JVX7 400 aa26.8■■□□□ 1.88
PNKP-219ENST00000626274 NBPF14Q5TI25 921 aa26.78■■□□□ 1.88
PNKP-219ENST00000626274 MPRIPQ6WCQ1 1025 aa26.78■■□□□ 1.88
PNKP-219ENST00000626274 DCAF5Q96JK2 942 aa26.77■■□□□ 1.88
PNKP-219ENST00000626274 MYBBP1AQ9BQG0 1328 aaKnown RBP26.76■■□□□ 1.87
PNKP-219ENST00000626274 U2AF1L5P0DN76 240 aaPredicted RBP26.76■■□□□ 1.87
PNKP-219ENST00000626274 U2AF1Q01081 240 aaKnown RBP eCLIP26.76■■□□□ 1.87
PNKP-219ENST00000626274 LY75O60449 1722 aa26.76■■□□□ 1.87
PNKP-219ENST00000626274 TMOD3Q9NYL9 352 aa26.74■■□□□ 1.87
PNKP-219ENST00000626274 PSDA5PKW4 1024 aaPredicted RBP26.73■■□□□ 1.87
PNKP-219ENST00000626274 R3HDM1Q15032 1099 aaKnown RBP26.73■■□□□ 1.87
PNKP-219ENST00000626274 MTHFSDQ2M296 383 aaKnown RBP26.73■■□□□ 1.87
PNKP-219ENST00000626274 AKAP4Q5JQC9 854 aa26.73■■□□□ 1.87
PNKP-219ENST00000626274 PIGBQ92521 554 aa26.73■■□□□ 1.87
PNKP-219ENST00000626274 SCN11AQ9UI33 1791 aa26.72■■□□□ 1.87
PNKP-219ENST00000626274 ERVV-2B6SEH9 535 aa26.72■■□□□ 1.87
PNKP-219ENST00000626274 SLC27A3Q5K4L6 730 aa26.72■■□□□ 1.87
PNKP-219ENST00000626274 RSPH6AQ9H0K4 717 aa26.72■■□□□ 1.87
PNKP-219ENST00000626274 PRKRIP1Q9H875 184 aaPredicted RBP26.72■■□□□ 1.87
PNKP-219ENST00000626274 KDM6AO15550 1401 aaPredicted RBP26.72■■□□□ 1.87
PNKP-219ENST00000626274 VIRMAQ69YN4 1812 aaKnown RBP26.72■■□□□ 1.87
PNKP-219ENST00000626274 FCHSD2O94868 740 aa26.71■■□□□ 1.87
PNKP-219ENST00000626274 PRKAR2BP31323 418 aa26.71■■□□□ 1.87
PNKP-219ENST00000626274 SMARCC1Q92922 1105 aaPredicted RBP26.7■■□□□ 1.86
PNKP-219ENST00000626274 GAS2L2Q8NHY3 880 aa26.68■■□□□ 1.86
PNKP-219ENST00000626274 ANO8Q9HCE9 1232 aaPredicted RBP26.68■■□□□ 1.86
PNKP-219ENST00000626274 LRRC4BQ9NT99 713 aa26.68■■□□□ 1.86
PNKP-219ENST00000626274 PALLDQ8WX93 1383 aa26.68■■□□□ 1.86
PNKP-219ENST00000626274 CABP4P57796 275 aa26.67■■□□□ 1.86
PNKP-219ENST00000626274 PAPPAQ13219 1627 aa26.66■■□□□ 1.86
PNKP-219ENST00000626274 STK32BQ9NY57 414 aa26.66■■□□□ 1.86
PNKP-219ENST00000626274 CCNL1Q9UK58 526 aaPredicted RBP26.66■■□□□ 1.86
PNKP-219ENST00000626274 PHACTR3Q96KR7 559 aa26.65■■□□□ 1.86
PNKP-219ENST00000626274 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
PNKP-219ENST00000626274 RNMTO43148 476 aaKnown RBP26.63■■□□□ 1.85
PNKP-219ENST00000626274 KCNQ4P56696 695 aa26.63■■□□□ 1.85
PNKP-219ENST00000626274 SLC15A2Q16348 729 aa26.63■■□□□ 1.85
PNKP-219ENST00000626274 ASAP1Q9ULH1 1129 aa26.63■■□□□ 1.85
PNKP-219ENST00000626274 MAP3K5Q99683 1374 aa26.62■■□□□ 1.85
PNKP-219ENST00000626274 LGR6Q9HBX8 967 aa26.62■■□□□ 1.85
PNKP-219ENST00000626274 ATG3Q9NT62 314 aa26.62■■□□□ 1.85
PNKP-219ENST00000626274 TAF1LQ8IZX4 1826 aa26.61■■□□□ 1.85
PNKP-219ENST00000626274 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
PNKP-219ENST00000626274 HMGB2P26583 209 aaKnown RBP26.61■■□□□ 1.85
PNKP-219ENST00000626274 NFATC2IPQ8NCF5 419 aa26.61■■□□□ 1.85
PNKP-219ENST00000626274 NEFMP07197 916 aa26.6■■□□□ 1.85
PNKP-219ENST00000626274 PNNQ9H307 717 aaKnown RBP26.6■■□□□ 1.85
PNKP-219ENST00000626274 SLC52A2Q9HAB3 445 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms