RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	LINC01559	Q495D7	138 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	MPND	Q8N594	471 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZNF511	Q8NB15	262 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	BEGAIN	Q9BUH8	593 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZNF518A	Q6AHZ1	1483 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	ARHGEF40	Q8TER5	1519 aa		10.6	□□□□□ -0.71
LINC02028-223	ENST00000625668	DISP3	Q9P2K9	1392 aa		10.6	□□□□□ -0.71
LINC02028-223	ENST00000625668	KDM5C	P41229	1560 aa		10.6	□□□□□ -0.71
LINC02028-223	ENST00000625668	MYOM3	Q5VTT5	1437 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	TRAPPC8	Q9Y2L5	1435 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZFYVE16	Q7Z3T8	1539 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	VARS	P26640	1264 aa	Known RBP	10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	TBC1D2	Q9BYX2	928 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	TLL2	Q9Y6L7	1015 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	PLEKHH2	Q8IVE3	1493 aa		10.59	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZNF644	Q9H582	1327 aa	Predicted RBP	10.58	□□□□□ -0.71
LINC02028-223	ENST00000625668	YEATS2	Q9ULM3	1422 aa		10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	CAMSAP2	Q08AD1	1489 aa		10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	AFAP1	Q8N556	730 aa		10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	NXF1	Q9UBU9	619 aa	Known RBP	10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	KIAA1107	Q9UPP5	1409 aa		10.58	□□□□□ -0.72
LINC02028-223	ENST00000625668	MAGI2	Q86UL8	1455 aa		10.57	□□□□□ -0.72
LINC02028-223	ENST00000625668	PLEKHG3	A1L390	1219 aa		10.57	□□□□□ -0.72
LINC02028-223	ENST00000625668	DIXDC1	Q155Q3	683 aa		10.57	□□□□□ -0.72
LINC02028-223	ENST00000625668	LYPD8	Q6UX82	237 aa		10.57	□□□□□ -0.72
LINC02028-223	ENST00000625668	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.56	□□□□□ -0.72
LINC02028-223	ENST00000625668	NPAS3	Q8IXF0	933 aa		10.56	□□□□□ -0.72
LINC02028-223	ENST00000625668	PARP9	Q8IXQ6	854 aa		10.56	□□□□□ -0.72
LINC02028-223	ENST00000625668	SLC16A10	Q8TF71	515 aa		10.56	□□□□□ -0.72
LINC02028-223	ENST00000625668	PCDHB15	Q9Y5E8	787 aa		10.56	□□□□□ -0.72
LINC02028-223	ENST00000625668	MBD5	Q9P267	1494 aa		10.55	□□□□□ -0.72
LINC02028-223	ENST00000625668	SPTLC1	O15269	473 aa		10.55	□□□□□ -0.72
LINC02028-223	ENST00000625668	MIA2	Q96PC5	1412 aa		10.55	□□□□□ -0.72
LINC02028-223	ENST00000625668	MLH3	Q9UHC1	1453 aa		10.55	□□□□□ -0.72
LINC02028-223	ENST00000625668	CFAP99	D6REC4	459 aa		10.54	□□□□□ -0.72
LINC02028-223	ENST00000625668	NNT	Q13423	1086 aa		10.54	□□□□□ -0.72
LINC02028-223	ENST00000625668	FGD6	Q6ZV73	1430 aa		10.54	□□□□□ -0.72
LINC02028-223	ENST00000625668	DIP2C	Q9Y2E4	1556 aa		10.54	□□□□□ -0.72
LINC02028-223	ENST00000625668	INO80	Q9ULG1	1556 aa	Predicted RBP	10.53	□□□□□ -0.72
LINC02028-223	ENST00000625668	TRIM66	O15016	1216 aa		10.53	□□□□□ -0.72
LINC02028-223	ENST00000625668	ZFP42	Q96MM3	310 aa		10.53	□□□□□ -0.72
LINC02028-223	ENST00000625668	ABCA6	Q8N139	1617 aa		10.53	□□□□□ -0.72
LINC02028-223	ENST00000625668	CCDC141	Q6ZP82	1450 aa		10.53	□□□□□ -0.72
LINC02028-223	ENST00000625668	C9orf84	Q5VXU9	1444 aa		10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	F12	P00748	615 aa	Predicted RBP	10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	HRC	P23327	699 aa		10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	CTH	P32929	405 aa		10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	ATP10A	O60312	1499 aa		10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	ATP7A	Q04656	1500 aa		10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	SPAG9	O60271	1321 aa	Known RBP	10.52	□□□□□ -0.73
LINC02028-223	ENST00000625668	TIMP2	P16035	220 aa		10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	PRPF38B	Q5VTL8	546 aa	Known RBP	10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	CDK15	Q96Q40	435 aa		10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	KLF16	Q9BXK1	252 aa	Predicted RBP	10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	ZBTB3	Q9H5J0	574 aa		10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	ARHGEF5	Q12774	1597 aa		10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	PTPN23	Q9H3S7	1636 aa		10.51	□□□□□ -0.73
LINC02028-223	ENST00000625668	SIGLEC1	Q9BZZ2	1709 aa		10.5	□□□□□ -0.73
LINC02028-223	ENST00000625668	TCOF1	Q13428	1488 aa	Known RBP	10.5	□□□□□ -0.73
LINC02028-223	ENST00000625668		H3BM21	787 aa		10.5	□□□□□ -0.73
LINC02028-223	ENST00000625668	FAM174A	Q8TBP5	190 aa		10.5	□□□□□ -0.73
LINC02028-223	ENST00000625668	KIDINS220	Q9ULH0	1771 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	RERE	Q9P2R6	1566 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	ADH1C	P00326	375 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	MRPL14	Q6P1L8	145 aa	Known RBP	10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	RIC3	Q7Z5B4	369 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	IRF7	Q92985	503 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	MAP10	Q9P2G4	905 aa		10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.49	□□□□□ -0.73
LINC02028-223	ENST00000625668	SPATA31D1	Q6ZQQ2	1576 aa		10.48	□□□□□ -0.73
LINC02028-223	ENST00000625668	LOR	P23490	312 aa	Predicted RBP	10.48	□□□□□ -0.73
LINC02028-223	ENST00000625668	GMPR	P36959	345 aa		10.48	□□□□□ -0.73
LINC02028-223	ENST00000625668	WDR4	P57081	412 aa	Known RBP	10.48	□□□□□ -0.73
LINC02028-223	ENST00000625668	FOXJ1	Q92949	421 aa		10.48	□□□□□ -0.73
LINC02028-223	ENST00000625668	AK7	Q96M32	723 aa		10.47	□□□□□ -0.73
LINC02028-223	ENST00000625668	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.47	□□□□□ -0.73
LINC02028-223	ENST00000625668	VEGFB	P49765	207 aa		10.46	□□□□□ -0.73
LINC02028-223	ENST00000625668	CABLES1	Q8TDN4	633 aa		10.46	□□□□□ -0.73
LINC02028-223	ENST00000625668	ABCC5	O15440	1437 aa		10.46	□□□□□ -0.74
LINC02028-223	ENST00000625668	DAPK1	P53355	1430 aa		10.46	□□□□□ -0.74
LINC02028-223	ENST00000625668	PLXNC1	O60486	1568 aa		10.46	□□□□□ -0.74
LINC02028-223	ENST00000625668	MAST1	Q9Y2H9	1570 aa		10.46	□□□□□ -0.74
LINC02028-223	ENST00000625668	DNMT1	P26358	1616 aa	Known RBP	10.46	□□□□□ -0.74
LINC02028-223	ENST00000625668	BCORL1	Q5H9F3	1711 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	AGL	P35573	1532 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	A2M	P01023	1474 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	SHANK2	Q9UPX8	1470 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	ERBB4	Q15303	1308 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	SCARF1	Q14162	830 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	C4orf48	Q5BLP8	95 aa		10.45	□□□□□ -0.74
LINC02028-223	ENST00000625668	PER1	O15534	1290 aa	Predicted RBP	10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	TSPY4	P0CV99	314 aa		10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	TSPY10	P0CW01	314 aa		10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	MLEC	Q14165	292 aa		10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	FAM50A	Q14320	339 aa	Known RBP	10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	PURB	Q96QR8	312 aa	Known RBP	10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	CROCC2	H7BZ55	1655 aa		10.44	□□□□□ -0.74
LINC02028-223	ENST00000625668	ADAMTSL3	P82987	1691 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 76 ms