RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 SPATA31A6Q5VVP1 1343 aa25.23■■□□□ 1.63
TREX1-205ENST00000625293 VAMP4O75379 141 aa25.22■■□□□ 1.63
TREX1-205ENST00000625293 MS4A1P11836 297 aa25.22■■□□□ 1.63
TREX1-205ENST00000625293 DCTN1Q14203 1278 aa25.22■■□□□ 1.63
TREX1-205ENST00000625293 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
TREX1-205ENST00000625293 DZIP1LQ8IYY4 767 aaKnown RBP25.21■■□□□ 1.63
TREX1-205ENST00000625293 TRPM3Q9HCF6 1732 aaPredicted RBP25.21■■□□□ 1.63
TREX1-205ENST00000625293 TRIM27P14373 513 aa25.21■■□□□ 1.63
TREX1-205ENST00000625293 MVPQ14764 893 aaKnown RBP25.21■■□□□ 1.63
TREX1-205ENST00000625293 CABLES1Q8TDN4 633 aa25.21■■□□□ 1.63
TREX1-205ENST00000625293 SLIT3O75094 1523 aa25.21■■□□□ 1.63
TREX1-205ENST00000625293 PHRF1Q9P1Y6 1649 aaKnown RBP25.2■■□□□ 1.63
TREX1-205ENST00000625293 KIF16BQ96L93 1317 aa25.2■■□□□ 1.62
TREX1-205ENST00000625293 ADAMTS2O95450 1211 aa25.2■■□□□ 1.62
TREX1-205ENST00000625293 ATF7IPQ6VMQ6 1270 aa25.2■■□□□ 1.62
TREX1-205ENST00000625293 NOB1Q9ULX3 412 aaKnown RBP25.19■■□□□ 1.62
TREX1-205ENST00000625293 LTN1O94822 1766 aa25.18■■□□□ 1.62
TREX1-205ENST00000625293 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
TREX1-205ENST00000625293 KCNH5Q8NCM2 988 aa25.18■■□□□ 1.62
TREX1-205ENST00000625293 IGHDP01880 384 aa25.18■■□□□ 1.62
TREX1-205ENST00000625293 MTHFSDQ2M296 383 aaKnown RBP25.18■■□□□ 1.62
TREX1-205ENST00000625293 IP6K1Q92551 441 aa25.18■■□□□ 1.62
TREX1-205ENST00000625293 CRB1P82279 1406 aa25.17■■□□□ 1.62
TREX1-205ENST00000625293 MEX3CQ5U5Q3 659 aaKnown RBP25.17■■□□□ 1.62
TREX1-205ENST00000625293 SKAP1Q86WV1 359 aa25.16■■□□□ 1.62
TREX1-205ENST00000625293 CHL1O00533 1208 aa25.16■■□□□ 1.62
TREX1-205ENST00000625293 FTSJ3Q8IY81 847 aaKnown RBP25.16■■□□□ 1.62
TREX1-205ENST00000625293 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
TREX1-205ENST00000625293 ILDR2Q71H61 639 aa25.15■■□□□ 1.62
TREX1-205ENST00000625293 MCM10Q7L590 875 aa25.15■■□□□ 1.62
TREX1-205ENST00000625293 MRPL50Q8N5N7 158 aaKnown RBP25.15■■□□□ 1.62
TREX1-205ENST00000625293 USP19O94966 1318 aa25.15■■□□□ 1.62
TREX1-205ENST00000625293 IPO8O15397 1037 aaKnown RBP25.14■■□□□ 1.62
TREX1-205ENST00000625293 C8orf58Q8NAV2 365 aa25.14■■□□□ 1.62
TREX1-205ENST00000625293 GAS2L2Q8NHY3 880 aa25.14■■□□□ 1.62
TREX1-205ENST00000625293 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
TREX1-205ENST00000625293 PCDHB15Q9Y5E8 787 aa25.13■■□□□ 1.61
TREX1-205ENST00000625293 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
TREX1-205ENST00000625293 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
TREX1-205ENST00000625293 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
TREX1-205ENST00000625293 KIAA0232Q92628 1395 aa25.1■■□□□ 1.61
TREX1-205ENST00000625293 LRRC37A3O60309 1634 aa25.1■■□□□ 1.61
TREX1-205ENST00000625293 GCP02774 474 aa25.1■■□□□ 1.61
TREX1-205ENST00000625293 COL22A1Q8NFW1 1626 aaPredicted RBP25.09■■□□□ 1.61
TREX1-205ENST00000625293 POTEAQ6S8J7 498 aa25.09■■□□□ 1.61
TREX1-205ENST00000625293 ARHGEF25Q86VW2 580 aa25.09■■□□□ 1.61
TREX1-205ENST00000625293 DDX19BQ9UMR2 479 aa25.09■■□□□ 1.61
TREX1-205ENST00000625293 ALS2Q96Q42 1657 aa25.09■■□□□ 1.61
TREX1-205ENST00000625293 PDE4AP27815 886 aa25.08■■□□□ 1.61
TREX1-205ENST00000625293 TMEM57Q8N5G2 664 aa25.08■■□□□ 1.61
TREX1-205ENST00000625293 LTV1Q96GA3 475 aaPredicted RBP25.08■■□□□ 1.61
TREX1-205ENST00000625293 ELL2O00472 640 aaPredicted RBP25.08■■□□□ 1.6
TREX1-205ENST00000625293 BACH2Q9BYV9 841 aa25.08■■□□□ 1.6
TREX1-205ENST00000625293 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
TREX1-205ENST00000625293 NCAPD2Q15021 1401 aa25.06■■□□□ 1.6
TREX1-205ENST00000625293 ITPRIPQ8IWB1 547 aa25.05■■□□□ 1.6
TREX1-205ENST00000625293 NGLY1Q96IV0 654 aa25.05■■□□□ 1.6
TREX1-205ENST00000625293 AFF2P51816 1311 aa25.05■■□□□ 1.6
TREX1-205ENST00000625293 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
TREX1-205ENST00000625293 NBPF6Q5VWK0 638 aa25.04■■□□□ 1.6
TREX1-205ENST00000625293 NBPF4Q96M43 638 aa25.04■■□□□ 1.6
TREX1-205ENST00000625293 ZBTB40Q9NUA8 1239 aa25.03■■□□□ 1.6
TREX1-205ENST00000625293 MAP3K5Q99683 1374 aa25.02■■□□□ 1.6
TREX1-205ENST00000625293 ABCC4O15439 1325 aa25.02■■□□□ 1.6
TREX1-205ENST00000625293 GNAT3A8MTJ3 354 aa25.02■■□□□ 1.6
TREX1-205ENST00000625293 KRT24Q2M2I5 525 aa25.02■■□□□ 1.6
TREX1-205ENST00000625293 USHBP1Q8N6Y0 703 aa25.02■■□□□ 1.6
TREX1-205ENST00000625293 RWDD1Q9H446 243 aaPredicted RBP25.01■■□□□ 1.59
TREX1-205ENST00000625293 CAMTA1Q9Y6Y1 1673 aa25■■□□□ 1.59
TREX1-205ENST00000625293 HDAC1Q13547 482 aaPredicted RBP24.98■■□□□ 1.59
TREX1-205ENST00000625293 IL17REQ8NFR9 667 aa24.98■■□□□ 1.59
TREX1-205ENST00000625293 TSPYL4Q9UJ04 414 aa24.98■■□□□ 1.59
TREX1-205ENST00000625293 API5Q9BZZ5 524 aaKnown RBP24.97■■□□□ 1.59
TREX1-205ENST00000625293 RGPD2P0DJD1 1756 aa24.96■■□□□ 1.59
TREX1-205ENST00000625293 ZBTB7CA1YPR0 619 aa24.96■■□□□ 1.59
TREX1-205ENST00000625293 MSH5O43196 834 aa24.96■■□□□ 1.59
TREX1-205ENST00000625293 ZC3H6P61129 1189 aaKnown RBP24.96■■□□□ 1.59
TREX1-205ENST00000625293 MIS18AQ9NYP9 233 aa24.96■■□□□ 1.59
TREX1-205ENST00000625293 RGS3P49796 1198 aa24.95■■□□□ 1.59
TREX1-205ENST00000625293 FNBP4Q8N3X1 1017 aaPredicted RBP24.95■■□□□ 1.59
TREX1-205ENST00000625293 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.59
TREX1-205ENST00000625293 USP21Q9UK80 565 aa24.95■■□□□ 1.59
TREX1-205ENST00000625293 ABCA3Q99758 1704 aa24.95■■□□□ 1.59
TREX1-205ENST00000625293 RGS12O14924 1447 aa24.95■■□□□ 1.58
TREX1-205ENST00000625293 ZBTB7BO15156 539 aaPredicted RBP24.95■■□□□ 1.58
TREX1-205ENST00000625293 CEMIPQ8WUJ3 1361 aa24.94■■□□□ 1.58
TREX1-205ENST00000625293 ZNF772Q68DY9 489 aaPredicted RBP24.94■■□□□ 1.58
TREX1-205ENST00000625293 ANKRD24Q8TF21 1146 aa24.94■■□□□ 1.58
TREX1-205ENST00000625293 QTRT2Q9H974 415 aaKnown RBP24.94■■□□□ 1.58
TREX1-205ENST00000625293 AXIN2Q9Y2T1 843 aa24.94■■□□□ 1.58
TREX1-205ENST00000625293 LMO7Q8WWI1 1683 aa24.93■■□□□ 1.58
TREX1-205ENST00000625293 CHRNA2Q15822 529 aa24.93■■□□□ 1.58
TREX1-205ENST00000625293 FAM161AQ3B820 660 aa24.92■■□□□ 1.58
TREX1-205ENST00000625293 C8orf34Q49A92 452 aa24.92■■□□□ 1.58
TREX1-205ENST00000625293 PDZRN3Q9UPQ7 1066 aa24.92■■□□□ 1.58
TREX1-205ENST00000625293 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
TREX1-205ENST00000625293 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
TREX1-205ENST00000625293 CHMP4BQ9H444 224 aaKnown RBP24.91■■□□□ 1.58
TREX1-205ENST00000625293 TAF7Q15545 349 aaPredicted RBP24.9■■□□□ 1.58
TREX1-205ENST00000625293 PTPRCP08575 1304 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms