RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 USP35Q9P2H5 1018 aa26.55■■□□□ 1.84
PCDHB12-203ENST00000624949 PLCH1Q4KWH8 1693 aa26.54■■□□□ 1.84
PCDHB12-203ENST00000624949 TATP17735 454 aaPredicted RBP26.54■■□□□ 1.84
PCDHB12-203ENST00000624949 RTF1Q92541 710 aaKnown RBP26.54■■□□□ 1.84
PCDHB12-203ENST00000624949 LAS1LQ9Y4W2 734 aaKnown RBP26.54■■□□□ 1.84
PCDHB12-203ENST00000624949 MEGF6O75095 1541 aa26.53■■□□□ 1.84
PCDHB12-203ENST00000624949 GNAT3A8MTJ3 354 aa26.53■■□□□ 1.84
PCDHB12-203ENST00000624949 AMOTQ4VCS5 1084 aa26.53■■□□□ 1.84
PCDHB12-203ENST00000624949 CARD10Q9BWT7 1032 aa26.53■■□□□ 1.84
PCDHB12-203ENST00000624949 MYH16Q9H6N6 1097 aa26.52■■□□□ 1.84
PCDHB12-203ENST00000624949 ZNF530Q6P9A1 599 aaPredicted RBP26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 SPATA31A6Q5VVP1 1343 aa26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 CRB1P82279 1406 aa26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 CALD1Q05682 793 aaKnown RBP26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 TSR2Q969E8 191 aaKnown RBP26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 IL16Q14005 1332 aa26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 MAP3K5Q99683 1374 aa26.51■■□□□ 1.83
PCDHB12-203ENST00000624949 C8orf37Q96NL8 207 aa26.49■■□□□ 1.83
PCDHB12-203ENST00000624949 FANCIQ9NVI1 1328 aa26.48■■□□□ 1.83
PCDHB12-203ENST00000624949 C1orf141Q5JVX7 400 aa26.47■■□□□ 1.83
PCDHB12-203ENST00000624949 LRP6O75581 1613 aa26.47■■□□□ 1.83
PCDHB12-203ENST00000624949 NGLY1Q96IV0 654 aa26.47■■□□□ 1.83
PCDHB12-203ENST00000624949 HTATSF1O43719 755 aaKnown RBP26.46■■□□□ 1.83
PCDHB12-203ENST00000624949 AKAP4Q5JQC9 854 aa26.46■■□□□ 1.83
PCDHB12-203ENST00000624949 RCAN3Q9UKA8 241 aa26.46■■□□□ 1.83
PCDHB12-203ENST00000624949 NEFLP07196 543 aa26.46■■□□□ 1.83
PCDHB12-203ENST00000624949 SPG7Q9UQ90 795 aa26.46■■□□□ 1.83
PCDHB12-203ENST00000624949 IL2RBP14784 551 aa26.45■■□□□ 1.82
PCDHB12-203ENST00000624949 IFT57Q9NWB7 429 aa26.45■■□□□ 1.82
PCDHB12-203ENST00000624949 NRAPQ86VF7 1730 aa26.44■■□□□ 1.82
PCDHB12-203ENST00000624949 GNAI1P63096 354 aa26.44■■□□□ 1.82
PCDHB12-203ENST00000624949 IL17REQ8NFR9 667 aa26.44■■□□□ 1.82
PCDHB12-203ENST00000624949 SLIT2O94813 1529 aa26.44■■□□□ 1.82
PCDHB12-203ENST00000624949 PARP4Q9UKK3 1724 aaKnown RBP26.43■■□□□ 1.82
PCDHB12-203ENST00000624949 MEX3CQ5U5Q3 659 aaKnown RBP26.43■■□□□ 1.82
PCDHB12-203ENST00000624949 CFAP44Q96MT7 982 aa26.43■■□□□ 1.82
PCDHB12-203ENST00000624949 OVOS2A0A0G2JMS6 1433 aa26.43■■□□□ 1.82
PCDHB12-203ENST00000624949 MPRIPQ6WCQ1 1025 aa26.42■■□□□ 1.82
PCDHB12-203ENST00000624949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.42■■□□□ 1.82
PCDHB12-203ENST00000624949 NWD2Q9ULI1 1742 aa26.42■■□□□ 1.82
PCDHB12-203ENST00000624949 ZNF853P0CG23 659 aa26.42■■□□□ 1.82
PCDHB12-203ENST00000624949 LGR6Q9HBX8 967 aa26.42■■□□□ 1.82
PCDHB12-203ENST00000624949 MBIPQ9NS73 344 aa26.41■■□□□ 1.82
PCDHB12-203ENST00000624949 EXOSC9Q06265 439 aaKnown RBP26.4■■□□□ 1.82
PCDHB12-203ENST00000624949 CCDC9Q9Y3X0 531 aaKnown RBP26.4■■□□□ 1.82
PCDHB12-203ENST00000624949 PKD1L3Q7Z443 1732 aa26.4■■□□□ 1.82
PCDHB12-203ENST00000624949 ZCRB1Q8TBF4 217 aaKnown RBP26.39■■□□□ 1.82
PCDHB12-203ENST00000624949 PHKG2P15735 406 aa26.38■■□□□ 1.81
PCDHB12-203ENST00000624949 UNC5CLQ8IV45 518 aa26.38■■□□□ 1.81
PCDHB12-203ENST00000624949 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
PCDHB12-203ENST00000624949 PLEKHG2Q9H7P9 1386 aa26.38■■□□□ 1.81
PCDHB12-203ENST00000624949 IFNL2Q8IZJ0 200 aa26.38■■□□□ 1.81
PCDHB12-203ENST00000624949 CYP27B1O15528 508 aa26.37■■□□□ 1.81
PCDHB12-203ENST00000624949 LRRC37A3O60309 1634 aa26.37■■□□□ 1.81
PCDHB12-203ENST00000624949 SPATA31A1Q5TZJ5 1347 aa26.36■■□□□ 1.81
PCDHB12-203ENST00000624949 RNMTO43148 476 aaKnown RBP26.36■■□□□ 1.81
PCDHB12-203ENST00000624949 CEMIPQ8WUJ3 1361 aa26.36■■□□□ 1.81
PCDHB12-203ENST00000624949 CHL1O00533 1208 aa26.35■■□□□ 1.81
PCDHB12-203ENST00000624949 BCL9LQ86UU0 1499 aa26.35■■□□□ 1.81
PCDHB12-203ENST00000624949 FNBP4Q8N3X1 1017 aaPredicted RBP26.35■■□□□ 1.81
PCDHB12-203ENST00000624949 TSPYL4Q9UJ04 414 aa26.35■■□□□ 1.81
PCDHB12-203ENST00000624949 VIRMAQ69YN4 1812 aaKnown RBP26.34■■□□□ 1.81
PCDHB12-203ENST00000624949 DDX54Q8TDD1 881 aaKnown RBP26.34■■□□□ 1.81
PCDHB12-203ENST00000624949 PCDH11XQ9BZA7 1347 aa26.34■■□□□ 1.81
PCDHB12-203ENST00000624949 PCDH11YQ9BZA8 1340 aa26.34■■□□□ 1.81
PCDHB12-203ENST00000624949 USP21Q9UK80 565 aa26.34■■□□□ 1.81
PCDHB12-203ENST00000624949 SPATA31A5Q5VU36 1347 aa26.33■■□□□ 1.81
PCDHB12-203ENST00000624949 SPATA31A7Q8IWB4 1347 aa26.33■■□□□ 1.81
PCDHB12-203ENST00000624949 TEFQ10587 303 aa26.33■■□□□ 1.81
PCDHB12-203ENST00000624949 IRX6P78412 446 aaPredicted RBP26.33■■□□□ 1.8
PCDHB12-203ENST00000624949 TAF7Q15545 349 aaPredicted RBP26.33■■□□□ 1.8
PCDHB12-203ENST00000624949 DISP2A7MBM2 1401 aa26.32■■□□□ 1.8
PCDHB12-203ENST00000624949 ELL2O00472 640 aaPredicted RBP26.31■■□□□ 1.8
PCDHB12-203ENST00000624949 THRAP3Q9Y2W1 955 aaKnown RBP26.31■■□□□ 1.8
PCDHB12-203ENST00000624949 KDM6AO15550 1401 aaPredicted RBP26.3■■□□□ 1.8
PCDHB12-203ENST00000624949 SHANK3Q9BYB0 1731 aa26.3■■□□□ 1.8
PCDHB12-203ENST00000624949 WNK3Q9BYP7 1800 aa26.29■■□□□ 1.8
PCDHB12-203ENST00000624949 BCAR3O75815 825 aa26.29■■□□□ 1.8
PCDHB12-203ENST00000624949 HSP90AB1P08238 724 aaKnown RBP26.29■■□□□ 1.8
PCDHB12-203ENST00000624949 VPS72Q15906 364 aa26.29■■□□□ 1.8
PCDHB12-203ENST00000624949 TSPYL6Q8N831 410 aa26.29■■□□□ 1.8
PCDHB12-203ENST00000624949 AFF2P51816 1311 aa26.28■■□□□ 1.8
PCDHB12-203ENST00000624949 RRP1P56182 461 aaKnown RBP26.28■■□□□ 1.8
PCDHB12-203ENST00000624949 C8orf58Q8NAV2 365 aa26.28■■□□□ 1.8
PCDHB12-203ENST00000624949 DCAF5Q96JK2 942 aa26.28■■□□□ 1.8
PCDHB12-203ENST00000624949 RNF123Q5XPI4 1314 aa26.28■■□□□ 1.8
PCDHB12-203ENST00000624949 KRT24Q2M2I5 525 aa26.27■■□□□ 1.8
PCDHB12-203ENST00000624949 SCN11AQ9UI33 1791 aa26.27■■□□□ 1.8
PCDHB12-203ENST00000624949 ADAMTS7Q9UKP4 1686 aa26.27■■□□□ 1.8
PCDHB12-203ENST00000624949 RARSP54136 660 aaKnown RBP26.27■■□□□ 1.8
PCDHB12-203ENST00000624949 BCL2L13Q9BXK5 485 aa26.27■■□□□ 1.8
PCDHB12-203ENST00000624949 EXOC5O00471 708 aa26.26■■□□□ 1.79
PCDHB12-203ENST00000624949 PLIN1O60240 522 aa26.26■■□□□ 1.79
PCDHB12-203ENST00000624949 CT47B1P0C2W7 299 aaPredicted RBP26.26■■□□□ 1.79
PCDHB12-203ENST00000624949 BTBD11A6QL63 1104 aa26.26■■□□□ 1.79
PCDHB12-203ENST00000624949 TWISTNBQ3B726 338 aaPredicted RBP26.26■■□□□ 1.79
PCDHB12-203ENST00000624949 CDCA7Q9BWT1 371 aaPredicted RBP26.25■■□□□ 1.79
PCDHB12-203ENST00000624949 FAM98CQ17RN3 349 aaKnown RBP26.24■■□□□ 1.79
PCDHB12-203ENST00000624949 BARGINQ6ZT62 677 aa26.24■■□□□ 1.79
PCDHB12-203ENST00000624949 SLC52A2Q9HAB3 445 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms