RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.43
SRGAP2-217ENST00000624873 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 GOLGA6L6A8MZA4 724 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 HIP1O00291 1037 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 CPLX1O14810 134 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 CCDC184Q52MB2 194 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 SIL1Q9H173 461 aa12.39□□□□□ -0.43
SRGAP2-217ENST00000624873 ASXL1Q8IXJ9 1541 aa12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 NRDCO43847 1150 aa12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 MYD88Q99836 296 aa12.38□□□□□ -0.43
SRGAP2-217ENST00000624873 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 HOXC9P31274 260 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
SRGAP2-217ENST00000624873 H3BQV1 296 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 PTMSP20962 102 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 EDC4Q6P2E9 1401 aaKnown RBP12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 DCAF5Q96JK2 942 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 TRIM29Q14134 588 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 USP21Q9UK80 565 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 COL17A1Q9UMD9 1497 aaPredicted RBP12.36□□□□□ -0.43
SRGAP2-217ENST00000624873 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 PHF14O94880 888 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.438e-6■■■■□ 20.7
SRGAP2-217ENST00000624873 EYA1Q99502 592 aa12.35□□□□□ -0.43
SRGAP2-217ENST00000624873 IL16Q14005 1332 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 TCEAL9Q9UHQ7 104 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 CDC45O75419 566 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
SRGAP2-217ENST00000624873 GPTP24298 496 aa12.33□□□□□ -0.43
SRGAP2-217ENST00000624873 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.43
SRGAP2-217ENST00000624873 FAM83GA6ND36 823 aa12.33□□□□□ -0.44
SRGAP2-217ENST00000624873 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
SRGAP2-217ENST00000624873 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
SRGAP2-217ENST00000624873 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
SRGAP2-217ENST00000624873 FLIIQ13045 1269 aa12.33□□□□□ -0.44
SRGAP2-217ENST00000624873 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 CARD14Q9BXL6 1004 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 ANKIB1Q9P2G1 1089 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 ADCY10Q96PN6 1610 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 ST5P78524 1137 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 DDX46Q7L014 1031 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 AACSQ86V21 672 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 CDC5LQ99459 802 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 PTPRCP08575 1304 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-217ENST00000624873 PDE4AP27815 886 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms