RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 HMOX1P09601 288 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 E9PSI1 815 aa13.54□□□□□ -0.24
ATRX-216ENST00000624403 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
ATRX-216ENST00000624403 FLT4P35916 1363 aa13.54□□□□□ -0.24
ATRX-216ENST00000624403 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
ATRX-216ENST00000624403 AMPHP49418 695 aa13.53□□□□□ -0.24
ATRX-216ENST00000624403 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
ATRX-216ENST00000624403 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
ATRX-216ENST00000624403 NFAT5O94916 1531 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 SLIT3O75094 1523 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 NEFMP07197 916 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 PLCG2P16885 1265 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 HOXC9P31274 260 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 RIPK4P57078 832 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
ATRX-216ENST00000624403 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
ATRX-216ENST00000624403 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 USP19O94966 1318 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
ATRX-216ENST00000624403 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
ATRX-216ENST00000624403 ERICH6BQ5W0A0 696 aa13.48□□□□□ -0.25
ATRX-216ENST00000624403 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 IP6K1Q92551 441 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 PXDNQ92626 1479 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 GCP02774 474 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.25
ATRX-216ENST00000624403 EYA1Q99502 592 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 IL16Q14005 1332 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
ATRX-216ENST00000624403 MYH16Q9H6N6 1097 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 LTN1O94822 1766 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
ATRX-216ENST00000624403 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
ATRX-216ENST00000624403 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
ATRX-216ENST00000624403 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 KDRP35968 1356 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 SPATA31A3Q5VYP0 1347 aa13.43□□□□□ -0.26
ATRX-216ENST00000624403 POTEMA6NI47 508 aa13.43□□□□□ -0.26
ATRX-216ENST00000624403 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 PLIN1O60240 522 aa13.41□□□□□ -0.26
ATRX-216ENST00000624403 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
ATRX-216ENST00000624403 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
ATRX-216ENST00000624403 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
ATRX-216ENST00000624403 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
ATRX-216ENST00000624403 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
ATRX-216ENST00000624403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.278e-7■■■□□ 17
ATRX-216ENST00000624403 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
ATRX-216ENST00000624403 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 BCAR3O75815 825 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
ATRX-216ENST00000624403 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
ATRX-216ENST00000624403 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 ANKRD24Q8TF21 1146 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 IFT57Q9NWB7 429 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms