RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 IP6K1Q92551 441 aa20.43■□□□□ 0.86
PCDHB6-202ENST00000622991 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
PCDHB6-202ENST00000622991 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
PCDHB6-202ENST00000622991 GSE1Q14687 1217 aa20.42■□□□□ 0.86
PCDHB6-202ENST00000622991 MVPQ14764 893 aaKnown RBP20.42■□□□□ 0.86
PCDHB6-202ENST00000622991 TWISTNBQ3B726 338 aaPredicted RBP20.42■□□□□ 0.86
PCDHB6-202ENST00000622991 ALDH1L2Q3SY69 923 aa20.41■□□□□ 0.86
PCDHB6-202ENST00000622991 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
PCDHB6-202ENST00000622991 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
PCDHB6-202ENST00000622991 MST1RQ04912 1400 aa20.41■□□□□ 0.86
PCDHB6-202ENST00000622991 CHL1O00533 1208 aa20.4■□□□□ 0.86
PCDHB6-202ENST00000622991 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
PCDHB6-202ENST00000622991 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
PCDHB6-202ENST00000622991 TMEM57Q8N5G2 664 aa20.4■□□□□ 0.86
PCDHB6-202ENST00000622991 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
PCDHB6-202ENST00000622991 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.85
PCDHB6-202ENST00000622991 CRB1P82279 1406 aa20.39■□□□□ 0.85
PCDHB6-202ENST00000622991 ARHGEF25Q86VW2 580 aa20.38■□□□□ 0.85
PCDHB6-202ENST00000622991 ITPRIPQ8IWB1 547 aa20.38■□□□□ 0.85
PCDHB6-202ENST00000622991 RTL1A6NKG5 1358 aa20.38■□□□□ 0.85
PCDHB6-202ENST00000622991 LTN1O94822 1766 aa20.38■□□□□ 0.85
PCDHB6-202ENST00000622991 KIF16BQ96L93 1317 aa20.37■□□□□ 0.85
PCDHB6-202ENST00000622991 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
PCDHB6-202ENST00000622991 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
PCDHB6-202ENST00000622991 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
PCDHB6-202ENST00000622991 ZNF428Q96B54 188 aa20.36■□□□□ 0.85
PCDHB6-202ENST00000622991 RGS3P49796 1198 aa20.35■□□□□ 0.85
PCDHB6-202ENST00000622991 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
PCDHB6-202ENST00000622991 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
PCDHB6-202ENST00000622991 USP19O94966 1318 aa20.35■□□□□ 0.85
PCDHB6-202ENST00000622991 PDE4AP27815 886 aa20.34■□□□□ 0.85
PCDHB6-202ENST00000622991 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
PCDHB6-202ENST00000622991 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
PCDHB6-202ENST00000622991 ZNF335Q9H4Z2 1342 aaPredicted RBP20.34■□□□□ 0.85
PCDHB6-202ENST00000622991 TRPM3Q9HCF6 1732 aaPredicted RBP20.34■□□□□ 0.85
PCDHB6-202ENST00000622991 MS4A1P11836 297 aa20.33■□□□□ 0.85
PCDHB6-202ENST00000622991 IL17REQ8NFR9 667 aa20.33■□□□□ 0.85
PCDHB6-202ENST00000622991 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.84
PCDHB6-202ENST00000622991 MSH6P52701 1360 aa20.33■□□□□ 0.84
PCDHB6-202ENST00000622991 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
PCDHB6-202ENST00000622991 SLIT3O75094 1523 aa20.32■□□□□ 0.84
PCDHB6-202ENST00000622991 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
PCDHB6-202ENST00000622991 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
PCDHB6-202ENST00000622991 STRCQ7RTU9 1775 aa20.31■□□□□ 0.84
PCDHB6-202ENST00000622991 DCCP43146 1447 aa20.31■□□□□ 0.84
PCDHB6-202ENST00000622991 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
PCDHB6-202ENST00000622991 GLIPR1L2Q4G1C9 344 aa20.3■□□□□ 0.84
PCDHB6-202ENST00000622991 BACH2Q9BYV9 841 aa20.3■□□□□ 0.84
PCDHB6-202ENST00000622991 AAMPQ13685 434 aa20.3■□□□□ 0.84
PCDHB6-202ENST00000622991 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
PCDHB6-202ENST00000622991 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
PCDHB6-202ENST00000622991 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
PCDHB6-202ENST00000622991 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
PCDHB6-202ENST00000622991 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
PCDHB6-202ENST00000622991 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
PCDHB6-202ENST00000622991 ARHGAP45Q92619 1136 aa20.27■□□□□ 0.84
PCDHB6-202ENST00000622991 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
PCDHB6-202ENST00000622991 RGPD2P0DJD1 1756 aa20.27■□□□□ 0.83
PCDHB6-202ENST00000622991 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.83
PCDHB6-202ENST00000622991 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
PCDHB6-202ENST00000622991 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
PCDHB6-202ENST00000622991 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
PCDHB6-202ENST00000622991 NFKBIBQ15653 356 aa20.25■□□□□ 0.83
PCDHB6-202ENST00000622991 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
PCDHB6-202ENST00000622991 ALS2Q96Q42 1657 aa20.25■□□□□ 0.83
PCDHB6-202ENST00000622991 XIRP1Q702N8 1843 aaKnown RBP20.24■□□□□ 0.83
PCDHB6-202ENST00000622991 ABCC4O15439 1325 aa20.24■□□□□ 0.83
PCDHB6-202ENST00000622991 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
PCDHB6-202ENST00000622991 ZBTB7BO15156 539 aaPredicted RBP20.24■□□□□ 0.83
PCDHB6-202ENST00000622991 C1orf115Q9H7X2 142 aa20.24■□□□□ 0.83
PCDHB6-202ENST00000622991 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
PCDHB6-202ENST00000622991 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
PCDHB6-202ENST00000622991 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
PCDHB6-202ENST00000622991 ERBB3P21860 1342 aa20.22■□□□□ 0.83
PCDHB6-202ENST00000622991 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 PXDNQ92626 1479 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 G2E3Q7L622 706 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
PCDHB6-202ENST00000622991 C8orf34Q49A92 452 aa20.2■□□□□ 0.82
PCDHB6-202ENST00000622991 DDRGK1Q96HY6 314 aa20.2■□□□□ 0.82
PCDHB6-202ENST00000622991 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
PCDHB6-202ENST00000622991 TNS3Q68CZ2 1445 aa20.2■□□□□ 0.82
PCDHB6-202ENST00000622991 RGS12O14924 1447 aa20.2■□□□□ 0.82
PCDHB6-202ENST00000622991 HDAC1Q13547 482 aaPredicted RBP20.19■□□□□ 0.82
PCDHB6-202ENST00000622991 ZMYND15Q9H091 742 aa20.19■□□□□ 0.82
PCDHB6-202ENST00000622991 LRRC37A3O60309 1634 aa20.19■□□□□ 0.82
PCDHB6-202ENST00000622991 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
PCDHB6-202ENST00000622991 NCAPD2Q15021 1401 aa20.18■□□□□ 0.82
PCDHB6-202ENST00000622991 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
PCDHB6-202ENST00000622991 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
PCDHB6-202ENST00000622991 RGPD5Q99666 1765 aa20.17■□□□□ 0.82
PCDHB6-202ENST00000622991 KCNQ3O43525 872 aa20.17■□□□□ 0.82
PCDHB6-202ENST00000622991 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
PCDHB6-202ENST00000622991 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
PCDHB6-202ENST00000622991 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
PCDHB6-202ENST00000622991 AKAP4Q5JQC9 854 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms