RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
PCDHB2-202ENST00000622947 RGPD5Q99666 1765 aa23.71■■□□□ 1.39
PCDHB2-202ENST00000622947 ELL2O00472 640 aaPredicted RBP23.7■■□□□ 1.38
PCDHB2-202ENST00000622947 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
PCDHB2-202ENST00000622947 NBR1Q14596 966 aa23.69■■□□□ 1.38
PCDHB2-202ENST00000622947 BRINP3Q76B58 766 aa23.69■■□□□ 1.38
PCDHB2-202ENST00000622947 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
PCDHB2-202ENST00000622947 CHL1O00533 1208 aa23.68■■□□□ 1.38
PCDHB2-202ENST00000622947 TRIM27P14373 513 aa23.68■■□□□ 1.38
PCDHB2-202ENST00000622947 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
PCDHB2-202ENST00000622947 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
PCDHB2-202ENST00000622947 SKAP1Q86WV1 359 aa23.68■■□□□ 1.38
PCDHB2-202ENST00000622947 KRT24Q2M2I5 525 aa23.67■■□□□ 1.38
PCDHB2-202ENST00000622947 ALDH1L2Q3SY69 923 aa23.67■■□□□ 1.38
PCDHB2-202ENST00000622947 GAS2L2Q8NHY3 880 aa23.67■■□□□ 1.38
PCDHB2-202ENST00000622947 ZC3H6P61129 1189 aaKnown RBP23.66■■□□□ 1.38
PCDHB2-202ENST00000622947 CABLES1Q8TDN4 633 aa23.65■■□□□ 1.38
PCDHB2-202ENST00000622947 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
PCDHB2-202ENST00000622947 MIS18AQ9NYP9 233 aa23.65■■□□□ 1.38
PCDHB2-202ENST00000622947 TNS3Q68CZ2 1445 aa23.65■■□□□ 1.38
PCDHB2-202ENST00000622947 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
PCDHB2-202ENST00000622947 ATF7IPQ6VMQ6 1270 aa23.64■■□□□ 1.37
PCDHB2-202ENST00000622947 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
PCDHB2-202ENST00000622947 SPATA31A3Q5VYP0 1347 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 UBE2Q2Q8WVN8 375 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 ZNF428Q96B54 188 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 SLAIN2Q9P270 581 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 LRRC37A3O60309 1634 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
PCDHB2-202ENST00000622947 MRPL50Q8N5N7 158 aaKnown RBP23.62■■□□□ 1.37
PCDHB2-202ENST00000622947 RTF1Q92541 710 aaKnown RBP23.62■■□□□ 1.37
PCDHB2-202ENST00000622947 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
PCDHB2-202ENST00000622947 IGHDP01880 384 aa23.61■■□□□ 1.37
PCDHB2-202ENST00000622947 GNAT3A8MTJ3 354 aa23.61■■□□□ 1.37
PCDHB2-202ENST00000622947 MVPQ14764 893 aaKnown RBP23.61■■□□□ 1.37
PCDHB2-202ENST00000622947 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
PCDHB2-202ENST00000622947 COL18A1P39060 1754 aa23.61■■□□□ 1.37
PCDHB2-202ENST00000622947 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
PCDHB2-202ENST00000622947 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
PCDHB2-202ENST00000622947 CENPQQ7L2Z9 268 aaPredicted RBP23.6■■□□□ 1.37
PCDHB2-202ENST00000622947 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
PCDHB2-202ENST00000622947 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
PCDHB2-202ENST00000622947 HTATSF1O43719 755 aaKnown RBP23.59■■□□□ 1.37
PCDHB2-202ENST00000622947 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
PCDHB2-202ENST00000622947 RTL5Q5HYW3 569 aaPredicted RBP23.58■■□□□ 1.37
PCDHB2-202ENST00000622947 ERBB3P21860 1342 aa23.57■■□□□ 1.36
PCDHB2-202ENST00000622947 TMEM57Q8N5G2 664 aa23.57■■□□□ 1.36
PCDHB2-202ENST00000622947 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
PCDHB2-202ENST00000622947 TSPYL4Q9UJ04 414 aa23.55■■□□□ 1.36
PCDHB2-202ENST00000622947 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
PCDHB2-202ENST00000622947 LMO7Q8WWI1 1683 aa23.55■■□□□ 1.36
PCDHB2-202ENST00000622947 IPO8O15397 1037 aaKnown RBP23.55■■□□□ 1.36
PCDHB2-202ENST00000622947 MS4A1P11836 297 aa23.53■■□□□ 1.36
PCDHB2-202ENST00000622947 CHRNA2Q15822 529 aa23.53■■□□□ 1.36
PCDHB2-202ENST00000622947 ITPRIPQ8IWB1 547 aa23.53■■□□□ 1.36
PCDHB2-202ENST00000622947 LGR6Q9HBX8 967 aa23.52■■□□□ 1.36
PCDHB2-202ENST00000622947 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
PCDHB2-202ENST00000622947 IL27Q8NEV9 243 aa23.52■■□□□ 1.36
PCDHB2-202ENST00000622947 AAMPQ13685 434 aa23.51■■□□□ 1.35
PCDHB2-202ENST00000622947 ARHGAP45Q92619 1136 aa23.51■■□□□ 1.35
PCDHB2-202ENST00000622947 VIRMAQ69YN4 1812 aaKnown RBP23.5■■□□□ 1.35
PCDHB2-202ENST00000622947 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
PCDHB2-202ENST00000622947 DDX19BQ9UMR2 479 aa23.49■■□□□ 1.35
PCDHB2-202ENST00000622947 TAF7Q15545 349 aaPredicted RBP23.48■■□□□ 1.35
PCDHB2-202ENST00000622947 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
PCDHB2-202ENST00000622947 CPDO75976 1380 aa23.48■■□□□ 1.35
PCDHB2-202ENST00000622947 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
PCDHB2-202ENST00000622947 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
PCDHB2-202ENST00000622947 ABCC4O15439 1325 aa23.47■■□□□ 1.35
PCDHB2-202ENST00000622947 IPO9Q96P70 1041 aaKnown RBP23.47■■□□□ 1.35
PCDHB2-202ENST00000622947 ZBTB40Q9NUA8 1239 aa23.47■■□□□ 1.35
PCDHB2-202ENST00000622947 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
PCDHB2-202ENST00000622947 MPRIPQ6WCQ1 1025 aa23.45■■□□□ 1.35
PCDHB2-202ENST00000622947 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.35
PCDHB2-202ENST00000622947 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
PCDHB2-202ENST00000622947 RGS12O14924 1447 aa23.45■■□□□ 1.34
PCDHB2-202ENST00000622947 ABCA3Q99758 1704 aa23.44■■□□□ 1.34
PCDHB2-202ENST00000622947 ABCC6O95255 1503 aa23.44■■□□□ 1.34
PCDHB2-202ENST00000622947 ANP32AP39687 249 aaKnown RBP23.43■■□□□ 1.34
PCDHB2-202ENST00000622947 ZBTB7BO15156 539 aaPredicted RBP23.42■■□□□ 1.34
PCDHB2-202ENST00000622947 MEGF6O75095 1541 aa23.42■■□□□ 1.34
PCDHB2-202ENST00000622947 BABAM1Q9NWV8 329 aa23.41■■□□□ 1.34
PCDHB2-202ENST00000622947 KDM3BQ7LBC6 1761 aa23.41■■□□□ 1.34
PCDHB2-202ENST00000622947 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
PCDHB2-202ENST00000622947 HAP1P54257 671 aaPredicted RBP23.41■■□□□ 1.34
PCDHB2-202ENST00000622947 G2E3Q7L622 706 aa23.4■■□□□ 1.34
PCDHB2-202ENST00000622947 ZBTB47Q9UFB7 747 aaPredicted RBP23.4■■□□□ 1.34
PCDHB2-202ENST00000622947 RNMTO43148 476 aaKnown RBP23.4■■□□□ 1.34
PCDHB2-202ENST00000622947 KCNQ3O43525 872 aa23.4■■□□□ 1.34
PCDHB2-202ENST00000622947 API5Q9BZZ5 524 aaKnown RBP23.4■■□□□ 1.34
PCDHB2-202ENST00000622947 CSB-PGBD3P0DP91 1061 aa23.39■■□□□ 1.34
PCDHB2-202ENST00000622947 RGS3P49796 1198 aa23.39■■□□□ 1.33
PCDHB2-202ENST00000622947 C1orf141Q5JVX7 400 aa23.39■■□□□ 1.33
PCDHB2-202ENST00000622947 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
PCDHB2-202ENST00000622947 RTN4Q9NQC3 1192 aaKnown RBP23.38■■□□□ 1.33
PCDHB2-202ENST00000622947 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
PCDHB2-202ENST00000622947 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
PCDHB2-202ENST00000622947 RWDD1Q9H446 243 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms