RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 HAP1P54257 671 aaPredicted RBP28.77■■■□□ 2.2
NKX2-3-202ENST00000622383 SIRT2Q8IXJ6 389 aa28.77■■■□□ 2.2
NKX2-3-202ENST00000622383 TBC1D32Q96NH3 1257 aa28.77■■■□□ 2.2
NKX2-3-202ENST00000622383 PHF8Q9UPP1 1060 aa28.76■■■□□ 2.19
NKX2-3-202ENST00000622383 CHD1LQ86WJ1 897 aa28.75■■■□□ 2.19
NKX2-3-202ENST00000622383 RBM33Q96EV2 1170 aaKnown RBP28.75■■■□□ 2.19
NKX2-3-202ENST00000622383 RGS12O14924 1447 aa28.75■■■□□ 2.19
NKX2-3-202ENST00000622383 GAS2L2Q8NHY3 880 aa28.74■■■□□ 2.19
NKX2-3-202ENST00000622383 LNPKQ9C0E8 428 aa28.74■■■□□ 2.19
NKX2-3-202ENST00000622383 UPF2Q9HAU5 1272 aaKnown RBP28.74■■■□□ 2.19
NKX2-3-202ENST00000622383 INTS3Q68E01 1043 aaKnown RBP28.73■■■□□ 2.19
NKX2-3-202ENST00000622383 RTF1Q92541 710 aaKnown RBP28.73■■■□□ 2.19
NKX2-3-202ENST00000622383 GCC1Q96CN9 775 aa28.73■■■□□ 2.19
NKX2-3-202ENST00000622383 MIS18AQ9NYP9 233 aa28.73■■■□□ 2.19
NKX2-3-202ENST00000622383 NWD1Q149M9 1564 aa28.73■■■□□ 2.19
NKX2-3-202ENST00000622383 USP35Q9P2H5 1018 aa28.72■■■□□ 2.19
NKX2-3-202ENST00000622383 DEKP35659 375 aaKnown RBP28.7■■■□□ 2.19
NKX2-3-202ENST00000622383 ADGRL3Q9HAR2 1447 aa28.69■■■□□ 2.18
NKX2-3-202ENST00000622383 TSPYL4Q9UJ04 414 aa28.69■■■□□ 2.18
NKX2-3-202ENST00000622383 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
NKX2-3-202ENST00000622383 PTPRCP08575 1304 aa28.68■■■□□ 2.18
NKX2-3-202ENST00000622383 ANKRD45Q5TZF3 282 aa28.67■■■□□ 2.18
NKX2-3-202ENST00000622383 C14orf37Q86TY3 774 aa28.66■■■□□ 2.18
NKX2-3-202ENST00000622383 RTL1A6NKG5 1358 aa28.66■■■□□ 2.18
NKX2-3-202ENST00000622383 SLC4A2P04920 1241 aa28.64■■■□□ 2.18
NKX2-3-202ENST00000622383 LTV1Q96GA3 475 aaPredicted RBP28.64■■■□□ 2.17
NKX2-3-202ENST00000622383 NPHP4O75161 1426 aaPredicted RBP28.63■■■□□ 2.17
NKX2-3-202ENST00000622383 GNAT3A8MTJ3 354 aa28.63■■■□□ 2.17
NKX2-3-202ENST00000622383 BECN1Q14457 450 aa28.63■■■□□ 2.17
NKX2-3-202ENST00000622383 LRRC37A3O60309 1634 aa28.63■■■□□ 2.17
NKX2-3-202ENST00000622383 ESCO1Q5FWF5 840 aa28.62■■■□□ 2.17
NKX2-3-202ENST00000622383 NFKBIBQ15653 356 aa28.61■■■□□ 2.17
NKX2-3-202ENST00000622383 NFAT5O94916 1531 aa28.61■■■□□ 2.17
NKX2-3-202ENST00000622383 SETD1BQ9UPS6 1966 aaKnown RBP28.61■■■□□ 2.17
NKX2-3-202ENST00000622383 MFAP1P55081 439 aaKnown RBP28.61■■■□□ 2.17
NKX2-3-202ENST00000622383 IP6K1Q92551 441 aa28.61■■■□□ 2.17
NKX2-3-202ENST00000622383 PSME1Q06323 249 aa28.6■■■□□ 2.17
NKX2-3-202ENST00000622383 BMP2KLQ5H9B9 411 aa28.6■■■□□ 2.17
NKX2-3-202ENST00000622383 C22orf23Q9BZE7 217 aa28.6■■■□□ 2.17
NKX2-3-202ENST00000622383 ATP10DQ9P241 1426 aa28.6■■■□□ 2.17
NKX2-3-202ENST00000622383 IL17REQ8NFR9 667 aa28.59■■■□□ 2.17
NKX2-3-202ENST00000622383 MSH6P52701 1360 aa28.59■■■□□ 2.17
NKX2-3-202ENST00000622383 MAP3K5Q99683 1374 aa28.59■■■□□ 2.17
NKX2-3-202ENST00000622383 G2E3Q7L622 706 aa28.59■■■□□ 2.17
NKX2-3-202ENST00000622383 DCTPP1Q9H773 170 aa28.58■■■□□ 2.17
NKX2-3-202ENST00000622383 USHBP1Q8N6Y0 703 aa28.57■■■□□ 2.16
NKX2-3-202ENST00000622383 ANKRD44Q8N8A2 993 aa28.57■■■□□ 2.16
NKX2-3-202ENST00000622383 TBC1D2Q9BYX2 928 aa28.55■■■□□ 2.16
NKX2-3-202ENST00000622383 LTN1O94822 1766 aa28.55■■■□□ 2.16
NKX2-3-202ENST00000622383 RPAP2Q8IXW5 612 aaPredicted RBP28.55■■■□□ 2.16
NKX2-3-202ENST00000622383 MEIS3Q99687 375 aa28.55■■■□□ 2.16
NKX2-3-202ENST00000622383 CEP85Q6P2H3 762 aa28.54■■■□□ 2.16
NKX2-3-202ENST00000622383 KCNH5Q8NCM2 988 aa28.53■■■□□ 2.16
NKX2-3-202ENST00000622383 ORAI2Q96SN7 254 aa28.53■■■□□ 2.16
NKX2-3-202ENST00000622383 NBPF6Q5VWK0 638 aa28.52■■■□□ 2.16
NKX2-3-202ENST00000622383 NBPF4Q96M43 638 aa28.52■■■□□ 2.16
NKX2-3-202ENST00000622383 BABAM1Q9NWV8 329 aa28.52■■■□□ 2.16
NKX2-3-202ENST00000622383 TAF7Q15545 349 aaPredicted RBP28.51■■■□□ 2.15
NKX2-3-202ENST00000622383 F6X3S4 739 aa28.5■■■□□ 2.15
NKX2-3-202ENST00000622383 STK31Q9BXU1 1019 aa28.49■■■□□ 2.15
NKX2-3-202ENST00000622383 CCT4P50991 539 aaKnown RBP28.48■■■□□ 2.15
NKX2-3-202ENST00000622383 CCDC30Q5VVM6 783 aa28.48■■■□□ 2.15
NKX2-3-202ENST00000622383 SOS1Q07889 1333 aaPredicted RBP28.48■■■□□ 2.15
NKX2-3-202ENST00000622383 ANTXR1Q9H6X2 564 aa28.48■■■□□ 2.15
NKX2-3-202ENST00000622383 RBM25P49756 843 aaKnown RBP28.47■■■□□ 2.15
NKX2-3-202ENST00000622383 SLC4A10Q6U841 1118 aa28.47■■■□□ 2.15
NKX2-3-202ENST00000622383 PLEKHM2Q8IWE5 1019 aa28.47■■■□□ 2.15
NKX2-3-202ENST00000622383 PHRF1Q9P1Y6 1649 aaKnown RBP28.47■■■□□ 2.15
NKX2-3-202ENST00000622383 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
NKX2-3-202ENST00000622383 XPCQ01831 940 aaPredicted RBP28.46■■■□□ 2.15
NKX2-3-202ENST00000622383 FLIIQ13045 1269 aa28.45■■■□□ 2.14
NKX2-3-202ENST00000622383 FRAT2O75474 233 aaPredicted RBP28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 GCP02774 474 aa28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 FAM208AQ9UK61 1670 aaKnown RBP28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 ZBTB7CA1YPR0 619 aa28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 GSPT1P15170 499 aaKnown RBP28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 TBC1D9Q6ZT07 1266 aa28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 SLKQ9H2G2 1235 aaPredicted RBP28.44■■■□□ 2.14
NKX2-3-202ENST00000622383 ARHGEF25Q86VW2 580 aa28.43■■■□□ 2.14
NKX2-3-202ENST00000622383 SLIT3O75094 1523 aa28.43■■■□□ 2.14
NKX2-3-202ENST00000622383 C16orf71Q8IYS4 520 aaPredicted RBP28.42■■■□□ 2.14
NKX2-3-202ENST00000622383 NECTIN2Q92692 538 aa28.42■■■□□ 2.14
NKX2-3-202ENST00000622383 LRRC59Q96AG4 307 aaKnown RBP28.42■■■□□ 2.14
NKX2-3-202ENST00000622383 PROSER2Q86WR7 435 aaPredicted RBP28.41■■■□□ 2.14
NKX2-3-202ENST00000622383 MED1Q15648 1581 aaPredicted RBP28.4■■■□□ 2.14
NKX2-3-202ENST00000622383 FKBP5Q13451 457 aaPredicted RBP28.4■■■□□ 2.14
NKX2-3-202ENST00000622383 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
NKX2-3-202ENST00000622383 OTUD7AQ8TE49 926 aaPredicted RBP28.39■■■□□ 2.13
NKX2-3-202ENST00000622383 TTC22Q5TAA0 569 aa28.38■■■□□ 2.13
NKX2-3-202ENST00000622383 CDC45O75419 566 aa28.37■■■□□ 2.13
NKX2-3-202ENST00000622383 NCAPD2Q15021 1401 aa28.37■■■□□ 2.13
NKX2-3-202ENST00000622383 C1orf167Q5SNV9 1468 aa28.37■■■□□ 2.13
NKX2-3-202ENST00000622383 HMMRO75330 724 aa28.37■■■□□ 2.13
NKX2-3-202ENST00000622383 SMARCA5O60264 1052 aaPredicted RBP28.36■■■□□ 2.13
NKX2-3-202ENST00000622383 GNAI2P04899 355 aa28.36■■■□□ 2.13
NKX2-3-202ENST00000622383 KRT28Q7Z3Y7 464 aa28.36■■■□□ 2.13
NKX2-3-202ENST00000622383 TRPM3Q9HCF6 1732 aaPredicted RBP28.36■■■□□ 2.13
NKX2-3-202ENST00000622383 RGPD2P0DJD1 1756 aa28.36■■■□□ 2.13
NKX2-3-202ENST00000622383 HDGFL1Q5TGJ6 251 aa28.35■■■□□ 2.13
NKX2-3-202ENST00000622383 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms