RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 DOT1LQ8TEK3 1739 aa21.21■□□□□ 0.99
SNX12-206ENST00000622259 ANKRD24Q8TF21 1146 aa21.2■□□□□ 0.98
SNX12-206ENST00000622259 WDR90Q96KV7 1748 aa21.19■□□□□ 0.98
SNX12-206ENST00000622259 TOMM70O94826 608 aa21.19■□□□□ 0.98
SNX12-206ENST00000622259 TNS4Q8IZW8 715 aa21.19■□□□□ 0.98
SNX12-206ENST00000622259 TTC21AQ8NDW8 1320 aa21.19■□□□□ 0.98
SNX12-206ENST00000622259 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
SNX12-206ENST00000622259 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
SNX12-206ENST00000622259 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
SNX12-206ENST00000622259 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
SNX12-206ENST00000622259 ZNF692Q9BU19 519 aaPredicted RBP21.17■□□□□ 0.98
SNX12-206ENST00000622259 LTN1O94822 1766 aa21.16■□□□□ 0.98
SNX12-206ENST00000622259 NMRK2Q9NPI5 230 aa21.14■□□□□ 0.97
SNX12-206ENST00000622259 CICQ96RK0 1608 aaPredicted RBP21.14■□□□□ 0.97
SNX12-206ENST00000622259 AMIGO3Q86WK7 504 aa21.12■□□□□ 0.97
SNX12-206ENST00000622259 USP31Q70CQ4 1352 aa21.11■□□□□ 0.97
SNX12-206ENST00000622259 KTN1Q86UP2 1357 aaKnown RBP21.11■□□□□ 0.97
SNX12-206ENST00000622259 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
SNX12-206ENST00000622259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNX12-206ENST00000622259 C5P01031 1676 aa21.11■□□□□ 0.97
SNX12-206ENST00000622259 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
SNX12-206ENST00000622259 USP54Q70EL1 1684 aa21.09■□□□□ 0.97
SNX12-206ENST00000622259 NME9Q86XW9 330 aa21.09■□□□□ 0.97
SNX12-206ENST00000622259 USP47Q96K76 1375 aa21.09■□□□□ 0.97
SNX12-206ENST00000622259 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.97
SNX12-206ENST00000622259 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
SNX12-206ENST00000622259 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
SNX12-206ENST00000622259 RBM46Q8TBY0 533 aaKnown RBP21.06■□□□□ 0.96
SNX12-206ENST00000622259 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
SNX12-206ENST00000622259 FLAD1Q8NFF5 587 aa21.05■□□□□ 0.96
SNX12-206ENST00000622259 FAM208AQ9UK61 1670 aaKnown RBP21.04■□□□□ 0.96
SNX12-206ENST00000622259 MEGF6O75095 1541 aa21.04■□□□□ 0.96
SNX12-206ENST00000622259 SLC34A2O95436 690 aa21.03■□□□□ 0.96
SNX12-206ENST00000622259 ZCRB1Q8TBF4 217 aaKnown RBP21.03■□□□□ 0.96
SNX12-206ENST00000622259 SBNO2Q9Y2G9 1366 aa21.02■□□□□ 0.96
SNX12-206ENST00000622259 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 RGPD2P0DJD1 1756 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 PHF14O94880 888 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 IP6K1Q92551 441 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
SNX12-206ENST00000622259 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
SNX12-206ENST00000622259 PALLDQ8WX93 1383 aa20.98■□□□□ 0.95
SNX12-206ENST00000622259 N4BP2Q86UW6 1770 aaPredicted RBP20.98■□□□□ 0.95
SNX12-206ENST00000622259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.98■□□□□ 0.95
SNX12-206ENST00000622259 FSTL1Q12841 308 aa20.98■□□□□ 0.95
SNX12-206ENST00000622259 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
SNX12-206ENST00000622259 HSPA1AP0DMV8 641 aaKnown RBP20.97■□□□□ 0.95
SNX12-206ENST00000622259 HSPA1BP0DMV9 641 aaKnown RBP20.97■□□□□ 0.95
SNX12-206ENST00000622259 AK7Q96M32 723 aa20.97■□□□□ 0.95
SNX12-206ENST00000622259 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
SNX12-206ENST00000622259 C16orf71Q8IYS4 520 aaPredicted RBP20.96■□□□□ 0.95
SNX12-206ENST00000622259 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
SNX12-206ENST00000622259 A0A0G2JLW4 131 aa20.94■□□□□ 0.94
SNX12-206ENST00000622259 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
SNX12-206ENST00000622259 FBLN1P23142 703 aa20.93■□□□□ 0.94
SNX12-206ENST00000622259 C9orf131Q5VYM1 1079 aa20.93■□□□□ 0.94
SNX12-206ENST00000622259 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
SNX12-206ENST00000622259 MMP10P09238 476 aa20.91■□□□□ 0.94
SNX12-206ENST00000622259 HOXC9P31274 260 aa20.91■□□□□ 0.94
SNX12-206ENST00000622259 RRAGCQ9HB90 399 aa20.91■□□□□ 0.94
SNX12-206ENST00000622259 MAP3K19Q56UN5 1328 aa20.9■□□□□ 0.94
SNX12-206ENST00000622259 SSFA2P28290 1259 aa20.9■□□□□ 0.94
SNX12-206ENST00000622259 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
SNX12-206ENST00000622259 TGFB2P61812 414 aa20.89■□□□□ 0.93
SNX12-206ENST00000622259 NBPF6Q5VWK0 638 aa20.89■□□□□ 0.93
SNX12-206ENST00000622259 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
SNX12-206ENST00000622259 NBPF4Q96M43 638 aa20.89■□□□□ 0.93
SNX12-206ENST00000622259 FCHSD2O94868 740 aa20.88■□□□□ 0.93
SNX12-206ENST00000622259 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
SNX12-206ENST00000622259 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
SNX12-206ENST00000622259 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
SNX12-206ENST00000622259 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 DPEP1P16444 411 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 ITGB4P16144 1822 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 NSD3Q9BZ95 1437 aa20.87■□□□□ 0.93
SNX12-206ENST00000622259 PLEKHG2Q9H7P9 1386 aa20.86■□□□□ 0.93
SNX12-206ENST00000622259 TMC1Q8TDI8 760 aa20.86■□□□□ 0.93
SNX12-206ENST00000622259 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
SNX12-206ENST00000622259 AMPHP49418 695 aa20.84■□□□□ 0.93
SNX12-206ENST00000622259 SMC1BQ8NDV3 1235 aa20.84■□□□□ 0.93
SNX12-206ENST00000622259 A0A1W2PP64 1363 aa20.84■□□□□ 0.93
SNX12-206ENST00000622259 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
SNX12-206ENST00000622259 GNPATO15228 680 aa20.83■□□□□ 0.93
SNX12-206ENST00000622259 CYP27B1O15528 508 aa20.83■□□□□ 0.93
SNX12-206ENST00000622259 KCNA3P22001 575 aa20.83■□□□□ 0.93
SNX12-206ENST00000622259 HDGFL2Q7Z4V5 671 aaPredicted RBP20.83■□□□□ 0.93
SNX12-206ENST00000622259 PIGBQ92521 554 aa20.83■□□□□ 0.93
SNX12-206ENST00000622259 SMARCC1Q92922 1105 aaPredicted RBP20.83■□□□□ 0.93
SNX12-206ENST00000622259 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
SNX12-206ENST00000622259 ITPK1Q13572 414 aa20.82■□□□□ 0.92
SNX12-206ENST00000622259 TNRC6CQ9HCJ0 1690 aaKnown RBP20.82■□□□□ 0.92
SNX12-206ENST00000622259 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
SNX12-206ENST00000622259 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
SNX12-206ENST00000622259 SIK1P57059 783 aa20.81■□□□□ 0.92
SNX12-206ENST00000622259 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
SNX12-206ENST00000622259 RNF181Q9P0P0 153 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms